Shigella dysenteriae Sd197: SDY_0884
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Entry
SDY_0884 CDS
T00306
Symbol
ccmH
Name
(GenBank) possible subunit of heme lyase
KO
K02200
cytochrome c-type biogenesis protein CcmH
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
SDY_0884 (ccmH)
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Gene cluster
GFIT
Motif
Pfam:
TPR_CcmH_CycH
CcmH
TPR_2
TPR_14
TPR_19
TPR_16
TPR_8
NiFe-hyd_HybE
Transketolase_C_1
UPF0014
EDR4-like_1st
Motif
Other DBs
NCBI-ProteinID:
ABB61061
ShiBASE_China:
SDY0884
UniProt:
Q32HZ4
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Position
831550..832602
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AA seq
350 aa
AA seq
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MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIAT
DLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIY
ARSRRRVRVVPEAFPEQSVPEGKRAGYVVYLPGILVALIVAGVSYYQTGNYQQVKIWQQA
TAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASI
ATDAYATAYRLDPKNSDAALGYAEALTRSSAPNDNRLGGELLRQLVRTDHSNIRVLSMYA
FNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIERSIAQAMQHLLPQESK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttttattgggcgtgctgatgctgatgatctccggctcagcgctggcgaccatc
gacgtattgcagtttaaagatgaagcacaggaacaacagttccgtcagctcactgaagaa
ctgcgctgcccgaaatgccagaataacagcattgccgattccaactcgatgattgccacc
gacctgcgccagaaagtgtatgaactgatgcaggaaggcaaaagtaagaaagagattgtc
gattatatggtggcgcgttacggcaacttcgtcacttacgatccgccgttaacgccgctg
accgtgctgctgtgggtgcttccggtagtggctattggtattggcggttgggtcatatac
gcccgttcgcggcgtcgggtacgcgtggtaccggaagcgtttcctgaacaaagcgtgccg
gaaggtaagcgtgccggatatgttgtttatctgccgggtattttagtggcgttaattgta
gctggcgtcagctactaccagactggcaattatcagcaggtgaaaatctggcagcaggcc
acggcacaggctccggcgttgctggacagggcgctggatccgaaagccgatccgctcaac
gaagaagagatgtcgcgccttgcgctggggatgcgtactcaactgcaaaaaaatccggga
gatatagaaggctggattatgttgggccgcgttggcatggcgctgggtaacgccagtatc
gccaccgatgcatacgctactgcgtatcgcctcgatcctaaaaacagcgatgccgcactg
ggttatgctgaagcgttgacacgttcatctgctcccaacgacaaccgcctcggcggcgaa
ctgttgcgccagttggtgagaacggaccatagcaatattcgtgtgttaagcatgtatgcg
tttaatgcctttgagcagcagcgatttggcgaagccgttgccgcgtgggagatgatgttg
aaactcttacctgccaacgatactcgccgtgctgtgattgaacgtagtatcgcgcaggcg
atgcaacatttgttgccgcaggagagtaaataa
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