Shigella dysenteriae Sd197: SDY_0904
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Entry
SDY_0904 CDS
T00306
Symbol
spr
Name
(GenBank) putative lipoprotein
KO
K13694
murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.-
3.4.17.13
]
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdy01002
]
SDY_0904 (spr)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdy01011
]
SDY_0904 (spr)
Enzymes [BR:
sdy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.13 muramoyltetrapeptide carboxypeptidase
SDY_0904 (spr)
Peptidases and inhibitors [BR:
sdy01002
]
Cysteine peptidases
Family C40
SDY_0904 (spr)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdy01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
SDY_0904 (spr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
DUF6950
LRAT
DHQS
CHAP
DUF3485
Motif
Other DBs
NCBI-ProteinID:
ABB61080
ShiBASE_China:
SDY0904
UniProt:
Q32HX5
LinkDB
All DBs
Position
complement(853766..854332)
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AA seq
188 aa
AA seq
DB search
MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVGSETSSLQASQDEFENL
VRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEM
GKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNE
ARRVLSRS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatctcaaccgattttgagatatatcttgcgcgggatccccgcgattgcagta
gcggttctgctttctgcatgtagtgcaaataacaccgcaaagaatatgcatcctgagaca
cgtgcagtgggtagtgaaacatcatcactgcaagcttctcaggatgaatttgaaaacctg
gttcgtaatgtcgacgtaaaatcgcgaattatggatcagtatgctgactggaaaggcgta
cgttatcgtctgggcggcagcactaaaaaaggtatcgattgttctggtttcgtacagcgt
acattccgtgagcaatttggcttagaacttccgcgttcgacttacgaacagcaggaaatg
ggtaaatctgtttcccgcagtaatttgcgtacgggtgatttagttctgtttcgtgccggt
tcaacgggacgccatgtcggtatttatatcggcaacaatcagtttgtccatgcttccacc
agcagtggtgttattatttccagcatgaatgaaccgtactggaagaagcgttacaacgaa
gcacgccgggttctcagccgcagctaa
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