KEGG   Shigella dysenteriae Sd197: SDY_0988
Entry
SDY_0988          CDS       T00306                                 
Symbol
ycdC
Name
(GenBank) putative tet operon regulator
  KO
K09017  TetR/AcrR family transcriptional regulator
Organism
sdy  Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:sdy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sdy03000]
    SDY_0988 (ycdC)
Transcription factors [BR:sdy03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    SDY_0988 (ycdC)
SSDB
Motif
Pfam: TetR_C_3 TetR_N TetR_C_29
Other DBs
NCBI-ProteinID: ABB61156
ShiBASE_China: SDY0988
UniProt: Q32HP9
LinkDB
Position
936212..936850
AA seq 212 aa
MTQGAVKTTGKRSRAVNAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
NT seq 639 nt   +upstreamnt  +downstreamnt
atgacgcaaggcgcagtcaaaacaacgggtaaacgttcgcgcgcagtaaacgcgaagaaa
aaagcgattcttagcgcagcactggacactttttcacaattcggttttcacggcacaagg
ctggagcagatcgcagagttggcgggtgtttcaaaaaccaatctgctgtattacttcccg
tcaaaagaggcgctgtatattgccgtgctgcggcagattctcgatatctggctggcaccg
ttaaaagcgtttcgtgaagatttcgccccgctggcggcgatcaaagagtacatccgtctg
aagctggaagtctcacgcgattatccgcaggcttcgcgcctgttctgtatggagatgctg
gcaggcgcgccgctgttaatggatgaactgacgggcgatttgaaggcattaattgatgag
aaatcggcgctgattgccggttgggtcaaaagcggcaaactcgcgccaattgatccgcag
catttgatttttatgatttgggcttccactcaacattacgccgatttcgcccctcaggtg
gaggcagtgacaggcgcaacgttgcgcgatgaggtatttttcaatcaaacggttgaaaac
gtgcagcggattattattgaggggattcgaccacgctaa

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