Shigella dysenteriae Sd197: SDY_0988
Help
Entry
SDY_0988 CDS
T00306
Symbol
ycdC
Name
(GenBank) putative tet operon regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdy03000
]
SDY_0988 (ycdC)
Transcription factors [BR:
sdy03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SDY_0988 (ycdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
ABB61156
ShiBASE_China:
SDY0988
UniProt:
Q32HP9
LinkDB
All DBs
Position
936212..936850
Genome browser
AA seq
212 aa
AA seq
DB search
MTQGAVKTTGKRSRAVNAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaggcgcagtcaaaacaacgggtaaacgttcgcgcgcagtaaacgcgaagaaa
aaagcgattcttagcgcagcactggacactttttcacaattcggttttcacggcacaagg
ctggagcagatcgcagagttggcgggtgtttcaaaaaccaatctgctgtattacttcccg
tcaaaagaggcgctgtatattgccgtgctgcggcagattctcgatatctggctggcaccg
ttaaaagcgtttcgtgaagatttcgccccgctggcggcgatcaaagagtacatccgtctg
aagctggaagtctcacgcgattatccgcaggcttcgcgcctgttctgtatggagatgctg
gcaggcgcgccgctgttaatggatgaactgacgggcgatttgaaggcattaattgatgag
aaatcggcgctgattgccggttgggtcaaaagcggcaaactcgcgccaattgatccgcag
catttgatttttatgatttgggcttccactcaacattacgccgatttcgcccctcaggtg
gaggcagtgacaggcgcaacgttgcgcgatgaggtatttttcaatcaaacggttgaaaac
gtgcagcggattattattgaggggattcgaccacgctaa
DBGET
integrated database retrieval system