Shigella dysenteriae Sd197: SDY_1025
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Entry
SDY_1025 CDS
T00306
Symbol
iroC
Name
(GenBank) putative ABC transporter protein
KO
K18895
ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SDY_1025 (iroC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdy02000
]
SDY_1025 (iroC)
Transporters [BR:
sdy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SDY_1025 (iroC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
RsgA_GTPase
AAA_25
AAA_29
AAA_21
AAA_22
nSTAND1
SMC_N
ABC_ATPase
MMR_HSR1
AAA_16
NACHT
AAA_30
Dynamin_N
AAA_5
AAA_28
FtsK_SpoIIIE
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ABB61190
ShiBASE_China:
SDY1025
UniProt:
Q32HL5
LinkDB
All DBs
Position
complement(968581..972240)
Genome browser
AA seq
1219 aa
AA seq
DB search
MPANHTPTPANSWIVRLARVCWERKKLSVIVVVASVSTILLAALTPLLTRQAVNDALAGN
PARLPWLACGLLLIALVDFIGNYVRRGYAGMLSLWVQHTLRGRVFDSIQKLDGAGQDALR
TGQVISRTNSDLQQVHTLLQMCPVPLAVFTYYIAGIAVMLWMSPAMTLIVVCVLVCLAIT
ALRARRRVFAQTGLASDQLANLTEHIREVLAQISVVKSCVAEMRETHWLDRQSRQIVRVR
IGAVISQAMPGATMLALPVLGQIVLLCYGGWSVMHGRIDLGTFVAFASFLAMLTGPTRVL
ASFLVIAQRTQASVERVFALIDTRSQMEDGTESINSQVVGLELENMSFDYHHGDRHILSD
ISFSLRAGETVAVVGASGSGKSTLLMLLARFYDPCSGKIWLNTSEGRQNLRDIRLEALRR
RVGIVFEDAFLFAGTVAENIAYGHPQATADDIRRAAAAAGASDFINALPKGFDSLLTERG
TNLSGGQRQRIALARALITAPDVLILDDTTSAVDAVTEAEINTALGRYADEGHMLLVIAR
RRSTLQLASRVVVLDKGRMVDTGTPAELEARCPAFRALMTGDSDFLATSHNSHNELWPAE
PATQDDVTNTGDKGFVARMTRVPENAVQQALAGKGRKVTSLLKPVAWMFVIAALLIALDS
AAGVGVLILLQHGIDSGVAAGDMSIIGLCALLALCLVIVGWCSYSLQTVFAARAAESVQH
SVRLRSFGHMLRLGLPWHEKHADSRLTRMTVDVDSLARFLQNGLAGAATSLVTMFAIAAT
MFWLDPFLALTALSAVPVAALATMIYRRLSTPAYAQARLEIGKVNSTLQEKVSGLRVVQS
HGQQELEGARLRALSERFRATRVRAQKYLAVYFPFLTFCTEASYAAVLLVGASQVAAGEM
TAGVLAAFFLLLGQFYGPVQQLSGIVDAWQQATASGKHIDELLATEGTENLGSSSVLPVT
GALHLDEVTFSYPDSHEPALNKLTLTIPEGMVVAVVGRSGAGKSTLIKLIAGLYFPTHGN
IRIGVQMLDDASLTEYRRQIGLVDQDVALFSSDIAENIRYSRPSATNEDVEIASQRAGLY
EMVCNLPQGFRTPVNNGGADLSAGQRQLIALARAQLANAHILLLDEATSCLDRTSEERLM
SSLTDVVHAGKHSALIVAHRLTTAQRCDLIAVIDKGLLAEYGTHEQLLSAGGLYTRLWHD
SVSSTALHRQHNMKEETPG
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgaatcacactcccacaccggctaattcatggatagttcgcctggcgcgcgtg
tgctgggaacgtaagaaacttagtgtcatcgtggtggtagcgtcagtatcgactattttg
ctggctgcgctgacaccactgctgacaagacaggctgtgaatgacgcactggcgggcaat
ccggcccgcctgccgtggctggcctgcgggttactgttgatcgctttggttgatttcatc
ggtaactatgtgcgccgtggttatgccgggatgctctcactctgggtgcagcataccctc
agaggacgggtattcgacagtattcaaaaacttgacggcgcaggccaggatgcgctgcgc
accgggcaggtgatttcacggaccaacagcgatctgcagcaggtgcataccctgctgcag
atgtgcccggtgccgctggcagtgttcacttattacattgccggcattgccgtgatgctg
tggatgtcccctgccatgacgcttatcgtcgtgtgcgtactggtatgcctggcgatcacc
gcgcttcgtgcgcgtcgtagggtcttcgcgcaaaccgggctggcctcggaccaactggcg
aatctcaccgaacatatacgcgaggtgctggcacagatctcagtggtaaaatcctgtgtg
gcagagatgcgtgaaacgcactggctcgataggcagtcgcggcagattgtgcgtgtacgc
atcggtgcggttatctcgcaggcgatgcctggggccaccatgctggcgctaccggtgctc
gggcaaatcgtcctgctgtgctacggcgggtggtcggtcatgcacgggcggatcgatctc
ggtaccttcgttgcattcgccagcttcctcgcgatgctgaccgggccaacccgcgtactg
gcatcgtttctggttatcgcacagcgcactcaggcgtccgtggagcgggtgtttgcactg
atcgacacccgttcacagatggaggacgggacggagtcgattaacagtcaggttgtcgga
ctggaactggagaatatgagctttgactaccaccatggcgacagacatatcctcagcgat
atctccttttccctgcgcgccggtgaaaccgtggcggtggtgggcgcatcgggttcagga
aaatcgaccctgttgatgctgctggcgcgtttttatgatccctgctccggaaagatatgg
ctcaacaccagcgaaggccgacaaaatcttcgcgatatcagactggaggcgcttcgtcgc
agggtaggcatcgtatttgaagatgcttttctgtttgccggtacggtggcggaaaatatc
gcctatggccaccctcaggcaacggcggacgacattcgccgtgcggcagctgcagcagga
gccagcgattttatcaacgccctgccgaaaggcttcgatagcctgttaaccgaacggggt
acgaatctttccggcgggcagaggcagcgaatagcactggcgcgggcgctcattactgca
ccggacgtgttaatcctggatgataccacctcagcggttgatgctgttacggaagcggag
attaataccgcgctgggtcgctatgctgacgaagggcatatgctgctggtgattgcccga
cggcgttcaacgcttcagctagccagccgggttgtggtgctggataagggccgtatggtg
gataccggaaccccggcagaacttgaagcgcgctgtccggcgttccgcgcactgatgacc
ggcgacagcgattttctggccacgtcccacaatagccacaacgaattgtggccggctgaa
ccagcgacacaagacgatgtaacgaatacgggggataaaggttttgtcgcccgtatgacc
cgcgtaccggaaaatgcagtacagcaggcgctggccggtaaaggtcgcaaagtcacgtca
ctactgaagcctgtggcgtggatgttcgtcatcgccgctctgctgatcgcactcgattct
gcggcaggcgtaggggtgctgatactgttgcagcacggcattgactccggtgtcgccgca
ggcgatatgtcgatcatcggcctctgtgccctgctcgccctgtgcctggtcattgtgggc
tggtgcagttattctctgcagacggtcttcgccgccagagcggcggaatcagttcagcat
tcggtgcgcttgcgcagcttcggccatatgctgcgtcttggactcccctggcatgaaaag
catgccgattcgcgtcttacccgcatgaccgttgatgtggactctctcgcccgctttctg
caaaacggccttgccggtgcggccaccagtctggtgacgatgttcgcaatcgccgccacc
atgttctggctcgacccgttcctggcgctgacggcattaagcgcagtgccagtggccgca
ctggcaaccatgatttatcgccgcctcagtacccctgcttatgcacaggcacggctggaa
ataggcaaagtcaacagcaccctgcaggaaaaagtctctggcctgcgtgtcgtgcaatcg
catggtcagcaggaactggagggcgcccggctgcgcgcgttatcggagcgtttccgcgca
acccgtgtgcgagcacaaaaataccttgcagtctattttccgttcctgacattctgcacc
gaggcctcctatgccgccgttctgttagtgggagcttcgcaggtcgccgctggagaaatg
actgccggggtactggcggctttcttcctgttgctggggcaattctatgggccagtgcag
cagttatcagggattgtcgacgcctggcagcaggcgacagccagcggcaaacatattgat
gaactactggcgacagaaggcactgagaacctcgggtcctcttcggtcctccctgtcacc
ggtgcactgcatcttgatgaggtcacgttcagttatcccgacagtcacgagccagctctg
aacaaacttaccctgacgatcccagagggaatggttgtcgcggtcgtcggtcgcagcggt
gcgggtaagtcgacgctgattaagctgattgccgggttgtatttccccacgcacggcaac
atcagaatcggtgtgcaaatgctcgatgatgcctcgctcactgagtatcgtcgccagatt
gggcttgtcgatcaggatgtagcactgtttagtagtgatattgcagaaaacattcgttat
tcacggccatccgccaccaatgaagacgttgaaattgcctcacagcgggcagggctgtat
gagatggtgtgcaatctgccgcagggattccggacaccggtgaataacggcggagccgat
ctgtccgcaggtcagcgccagttgattgcgctggcccgcgcgcaactggcgaatgcccac
atcctgctgctcgacgaagccacgtcatgtctggatcgcacatccgaagaacgactgatg
tcatcgttaacagatgtcgtgcatgccgggaagcactcggcgctgattgttgcacatcgt
ctgaccaccgcgcaacgctgcgatctgattgccgttattgataaggggttacttgcggaa
tacggaacccacgaacagctgttatctgcgggcggcctctatacccgcttatggcatgac
agcgtcagcagtactgcgctccatcgccagcacaacatgaaggaggaaaccccgggatag
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integrated database retrieval system
