Shigella dysenteriae Sd197: SDY_1945
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Entry
SDY_1945 CDS
T00306
Symbol
ycjC
Name
(GenBank) conserved hypothetical protein
KO
K14056
HTH-type transcriptional regulator, repressor for puuD
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdy03000
]
SDY_1945 (ycjC)
Transcription factors [BR:
sdy03000
]
Prokaryotic type
Helix-turn-helix
Other families
SDY_1945 (ycjC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_2
HTH_3
HTH_31
HTH_19
HTH_26
AraC_binding
HTH_37
MqsA_antitoxin
MPI_cupin_dom
HTH_25
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
ABB62048
ShiBASE_China:
SDY1945
UniProt:
Q32F57
LinkDB
All DBs
Position
complement(1769266..1769823)
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AA seq
185 aa
AA seq
DB search
MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG
LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT
GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH
TPTTF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgagggactggcgccaggaaaacgcttgtcggaaatccgccagcagcagggg
ctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgata
gaacaggataaagtcagccctgccatcagtacgctgcaaaagctgctgaaggtgtatgga
ctgtcactctcggaattcttttccgagccggaaaaacctgatgaaccgcaggtcgtcatt
aatcaggacgacttaattgaaatgggcagtcagggtgtgtcgatgaagctggtgcataac
ggtaacccgaatcgcacgctggcgatgatctttgaaacgtaccagccgggcacaaccact
ggggaaagaattaagcatcagggtgaggaaataggcactgtactggaaggtgaaattgtt
ctgacgattaatggtcaggattaccacctcgtcgcggggcaaagttatgccattaatacc
ggcatcccgcacagtttcagtaatacgtcggcaggtatttgccgaattatcagcgcccat
acgcccactacgttttaa
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