Shigella dysenteriae Sd197: SDY_2017
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Entry
SDY_2017 CDS
T00306
Symbol
ymfC
Name
(GenBank) conserved hypothetical protein
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdy03009
]
SDY_2017 (ymfC)
Enzymes [BR:
sdy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
SDY_2017 (ymfC)
Ribosome biogenesis [BR:
sdy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SDY_2017 (ymfC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8729
Cyc-maltodext_C
Motif
Other DBs
NCBI-ProteinID:
ABB62112
ShiBASE_China:
SDY2017
UniProt:
Q32EZ3
LinkDB
All DBs
Position
1826345..1826968
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AA seq
207 aa
AA seq
DB search
MQKTSFRNHQVKRFSSQRSTRRKPDNQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQ
GVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVT
LNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFP
TLRLIRYAMGDYTLDNLANGEWREATE
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacttcttttagaaatcaccaggttaagcgattcagctcgcaacgttctacc
aggcgtaaacctgacaaccagcccacgcgtgtgatcctgttcaataaaccctacgatgtt
cttccgcagttcaccgatgaagccggacgcaaaacattaaaagaattcatcccggttcag
ggcgtttatgcagcaggtcgtcttgaccgcgatagcgaagggttactggtgctgaccaat
aacggcgcgttgcaggcgcgtttaacccagccgggcaaacgcaccggaaaaatctattat
gtgcaggtggaaggtattcccacacaagacgcacttgaagccttgcgcaatggcgtaacc
ttaaatgatggccctaccctgcccgcaggcgcggagctggttgacgagcccgcgtggtta
tggccgcggaatccaccaattcgtgaacgcaaaagtattcccaccagctggctgaagatc
accttatatgaaggacgtaatcgccaggtgcgccgcatgaccgcccatgttggtttcccc
acgctgcgactgattcgttatgcgatgggtgattacactttggataaccttgccaatggc
gaatggcgagaagcaacagaataa
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integrated database retrieval system
