KEGG   Shigella dysenteriae Sd197: SDY_2037
Entry
SDY_2037          CDS       T00306                                 
Symbol
ycfS
Name
(GenBank) conserved hypothetical protein
  KO
K19236  L,D-transpeptidase YcfS
Organism
sdy  Shigella dysenteriae Sd197
Pathway
sdy01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:sdy00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    SDY_2037 (ycfS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sdy01002]
    SDY_2037 (ycfS)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sdy01011]
    SDY_2037 (ycfS)
Peptidases and inhibitors [BR:sdy01002]
 Cysteine peptidases
  Family C82
   SDY_2037 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:sdy01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   SDY_2037 (ycfS)
SSDB
Motif
Pfam: Ldt_C YkuD LysM
Other DBs
NCBI-ProteinID: ABB62132
ShiBASE_China: SDY2037
UniProt: Q32EX3
LinkDB
Position
1849604..1850566
AA seq 320 aa
MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIA
KKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGK
NSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNI
INTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKNAAQTDAEVMQHVM
DVRSGMPVDVRRHQVSPQTL
NT seq 963 nt   +upstreamnt  +downstreamnt
gtgatgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtg
gcgctggcgctaccggcaaaagccaacacctggccgctgccgccagcgggcagtcgtctg
gttggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgcc
aaaaaatataacgtcggctttctcgctctgttacaggctaaccccggcgttgatccttac
gtaccgcgcgcgggcagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccg
cgcgaaggcattgtgatcaacattgcggagctgcgtctctattactacccgccgggtaaa
aattcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccg
acaatggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaac
atccgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccg
gataacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgctt
catggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctg
cgggatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatc
atcaacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacat
cagccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagc
gcaatgcaatcatttaaaaatgcagcacaaactgacgctgaagtgatgcaacatgtgatg
gatgtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctg
taa

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