Shigella dysenteriae Sd197: SDY_2194
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Entry
SDY_2194 CDS
T00306
Symbol
alkA
Name
(GenBank) 3-methyl-adenine DNA glycosylase II, inducible
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SDY_2194 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdy03400
]
SDY_2194 (alkA)
Enzymes [BR:
sdy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SDY_2194 (alkA)
DNA repair and recombination proteins [BR:
sdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SDY_2194 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ABB62280
ShiBASE_China:
SDY2194
UniProt:
Q32EH5
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All DBs
Position
1993951..1994799
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AA seq
282 aa
AA seq
DB search
MYTLNWQPPYDWSWMLGFLAARAVNGVETVADDYYARSLAVGEYRGVVTAIPDIARHTLH
INLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGVARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTAKVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgaacggtgtggaaacggtcgctgacgattattatgcccgtagtctggcg
gttggcgaatatcgcggcgtggtgacagctattccggatatagcccgccatactctgcac
ataaatttaagtgcaggtttagaacccgttgccgcagagtgtctggcgaaaatgagccgc
ctgtttgatctgcaatgtaacccgcagattgttaacggtgcgttgggcaagttaggcgtg
gcgcggcccggattgcgtttacccggcagtgttgatgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgaccgccaaagtggcacag
ctttatggcgaacggctggatgattttccggagtatatctgcttccccacgcctcagcgg
ctggcagcagcagacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcgctgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gatgtggagcaggcgatgaaaacgctgcaaacttttccgggtatcgggcgctggacggcg
aattattttgctttgcgtggctggcaggcgaaagatgttttcctgccggatgattatctg
attaaacagcgatttccgggaatgacaccggcgcaaatccgccgttatgccgagcgctgg
aagccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcagccagac
gaagcatga
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