Shigella dysenteriae Sd197: SDY_2262
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Entry
SDY_2262 CDS
T00306
Symbol
gatR
Name
(GenBank) Galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdy03000
]
SDY_2262 (gatR)
Transcription factors [BR:
sdy03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
SDY_2262 (gatR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
CoA_trans
HTH_PafC
CggR_N
HTH_5
DUF977
FeoC
DsrD
MutS_I
SelB_WH_2nd_bact
MarR
Motif
Other DBs
NCBI-ProteinID:
ABB62342
ShiBASE_China:
SDY2262
UniProt:
Q32EB3
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All DBs
Position
complement(2058358..2059137)
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AA seq
259 aa
AA seq
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MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAKGLMT
AKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGA
DGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDA
VSDVDKLALQKTRVKLITV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaattcattcgagcgaaggaataagatcatccaattagtgaatgaacaggga
accgtgcttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgcc
gatttgcgctttctcgaacaaaaaggcgtggttacgcgctttcatggtggtgcggcgaaa
ataatgtctggtaatagtgaaaccgagacccaggaagtcgggtttaaagaacgatttcag
ctcgccagcgcgccaaaaaacagaatagcgcaggcggcagtcaaaatgatccacgaaggg
atgaccgttattctcgacagcggaagtacgacaatgcttatcgccaaaggattaatgacc
gccaaaaatatcacggtgattaccaacagtctcccggcagcgtttgccctttccgaaaat
aaagacattactctggtcgtctgtggtggcacggtccgccataaaacgcgctcgatgcat
ggttccattgccgagcgttcattgcaggatattaatgccgatttaatgtttgtcggtgct
gatggtattgatgcggttaatggtattacgacctttaatgaaggttattcgattagcggg
gcgatggtcaccgccgcaaataaagtgattgccgttctcgattcatcgaaatttaatcgt
cgcggttttaatcaggtactgccaatcgaaaaaattgacattattattaccgatgatgcc
gtgtcagatgtggataaactggcattgcagaagacacgggtaaaattaattacggtgtag
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