Shigella dysenteriae Sd197: SDY_2340
Help
Entry
SDY_2340 CDS
T00306
Symbol
kdsB
Name
(GenBank) CTP:CMP-3-deoxy-D-manno-octulosonate transferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00540
Lipopolysaccharide biosynthesis
sdy01100
Metabolic pathways
sdy01250
Biosynthesis of nucleotide sugars
Module
sdy_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SDY_2340 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sdy01005
]
SDY_2340 (kdsB)
Enzymes [BR:
sdy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
SDY_2340 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
sdy01005
]
Lipid A
SDY_2340 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
NTP_transferase
PylC-like_N
DUF2067
Motif
Other DBs
NCBI-ProteinID:
ABB62417
ShiBASE_China:
SDY2340
UniProt:
Q32E38
LinkDB
All DBs
Position
complement(2131607..2132353)
Genome browser
AA seq
248 aa
AA seq
DB search
MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGADRIIVATDHEDVARAVEA
AGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQ
VGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWERDRFAKGLETVGDNFLR
HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAHEVPGTGVDTPEDL
ERVRAEMR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtggtcattattcccgcgcgctacgcgtcaacgcgtctgcccggtaaacca
ttggttgatattaatggcaaacccatgattgttcatgttcttgaacgtgctcgcgaatca
ggtgccgatcgcatcatcgtggcaaccgatcatgaggatgtcgcccgcgccgttgaagcc
gctggcggtgaagtatgtatgacgcgcgccgatcaccagtcagggacagaacgcttggcg
gaagttgtcgaaaaatgcgcgttcagcgacgacacggtgatcgttaatgtgcagggtgat
gaaccgatgatccctgcgacaatcattcgtcaggttgctgataacctcgctcagcgtcag
gtgggtatggcgactctggcggtgccaatccacaatgcggaagaagcgtttaacccgaat
gcggtgaaagtggttctcgacgctgaagggtatgcactgtacttctcacgcgctaccatt
ccgtgggagcgtgatcgttttgcaaaaggccttgaaaccgttggcgataacttcctgcgt
caccttggtatttatggctaccgtgcaggctttatccgtcgttacgtcacctggcagcca
agcccgttagaacacatcgaaatgttagagcagcttcgtgttctgtggtacggcgaaaaa
atccatgttgctgttgcgcatgaagttcctggcacaggtgtggatacccctgaagatctc
gagcgcgttcgcgctgaaatgcgctaa
DBGET
integrated database retrieval system
