Shigella dysenteriae Sd197: SDY_3030
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Entry
SDY_3030 CDS
T00306
Symbol
ygdL
Name
(GenBank) putative enzyme
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdy03016
]
SDY_3030 (ygdL)
Transfer RNA biogenesis [BR:
sdy03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SDY_3030 (ygdL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
UDPG_MGDP_dh_N
Sacchrp_dh_NADP
DAO
3HCDH_N
ELFV_dehydrog
NAD_binding_7
ApbA
TrkA_N
NT5C
Motif
Other DBs
NCBI-ProteinID:
ABB63049
ShiBASE_China:
SDY3030
UniProt:
Q32CA6
LinkDB
All DBs
Position
complement(2801774..2802580)
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AA seq
268 aa
AA seq
DB search
MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI
DMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQHMRV
GYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK
LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGA
ATMVTATFGFVAVSHALKKMMAKAAGQG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtaattagtgatgcatggcgtcagcgttttggtggcacagcgcgtctgtat
ggtgaaaaagcgttgcaactgtttgctgacgcgcatatttgtgtggtcggtattggcggt
gtcggttcctgggcggcggaagcgctggcgcgcacggggattggcgcaatcacgcttatc
gatatggatgatgtgtgcgtcaccaataccaatcggcaaattcatgccctgcgcgataac
gttgggctggcaaaagcggaagtcatggcggaacgtattcgccagattaacccggagtgc
cgtgtaacggtggtggatgatttcgtgacgccggataacgtagcgcagcatatgagagtg
ggttattcgtacgtgattgatgccattgatagtgtacgacccaaagcggcgctgattgct
tattgtcggcgcaataaaattccgctggtcacgaccggtggcgcgggtgggcagattgac
ccgacgcagattcaggttaccgatctggcgaaaacgattcaggacccgctggcggcgaag
ttgcgcgagcgcctgaaaagcgattttggcgtagtgaaaaacagtaaaggtaagctcggc
gtggattgcgtgttctctaccgaagcattggtgtatccgcagtcagacggtacggtgtgt
gcgatgaaagccacggcagaagggccgaagcggatggattgtgcatctggatttggtgcg
gcgacgatggtgaccgccacctttggttttgttgcggtttctcatgcgttgaagaagatg
atggcgaaagcggcgggtcaggggtaa
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