Shigella dysenteriae Sd197: SDY_3376
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Entry
SDY_3376 CDS
T00306
Symbol
yrbF
Name
(GenBank) putative ATP-binding component of a transport system
KO
K02065
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SDY_3376 (yrbF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdy02000
]
SDY_3376 (yrbF)
Transporters [BR:
sdy02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
gamma-Hexachlorocyclohexane transporter
SDY_3376 (yrbF)
Phospholipid transporter
SDY_3376 (yrbF)
Mce system transporter
SDY_3376 (yrbF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_ATPase
RsgA_GTPase
AAA_25
AAA_22
AAA_29
AAA_16
AAA_14
AAA_28
AAA_23
AAA_3
NACHT
AAA_24
nSTAND3
NB-ARC
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ABB63367
ShiBASE_China:
SDY3376
UniProt:
Q32BD8
LinkDB
All DBs
Position
complement(3130514..3131323)
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AA seq
269 aa
AA seq
DB search
MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP
DHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPL
LHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITM
GVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRV
RQFLDGIADGPVPFRYPAGDYHADLLPGS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtctgtggcgaatttagtcgatatgcgcgatgtcagttttacgcgtggcaat
cgctgcatcttcgataatatttccctgaccgtgccgcgagggaagatcacggcgatcatg
gggccatcgggcatcggtaaaacgacgctactccgtctgattggcgggcaaatcgcacca
gatcatggtgagatccttttcgatggtgagaatattccggcgatgtctcgttcgcgcctg
tatacagtgcgcaaacggatgagcatgttatttcagtccggggcgttgttcactgatatg
aacgtatttgacaacgtcgcctatccactgcgcgaacatacccaacttcccgcgccattg
ttgcatagtacggtgatgatgaagctggaggcagtggggctgcgtggagcggctaagcta
atgccttctgaactttccggtgggatggcgcggcgtgcagcgctggcgcgtgcgattgcg
ctggagccggatctcatcatgtttgatgaaccctttgttgggcaagatcccatcaccatg
ggcgtactggtgaagctgatttctgagctcaacagcgcgctgggcgtgacttgtgtggtg
gtttctcacgatgtgccggaagtgttaagtattgcggatcacgcttggatcctggcggac
aaaaaaattgtcgctcatggcagtgcccaggcgttgcaggcgaatcctgatccgcgcgta
cgtcagtttctggacgggatagctgacgggcctgttccgttccgctatcctgccggcgat
tatcacgctgatcttttaccagggagttaa
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