Shigella dysenteriae Sd197: SDY_3800
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Entry
SDY_3800 CDS
T00306
Symbol
rhsB
Name
(GenBank) rhsB protein in rhs element
Organism
sdy
Shigella dysenteriae Sd197
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
PAAR_motif
Motif
Other DBs
NCBI-ProteinID:
ABB63745
ShiBASE_China:
SDY3800
UniProt:
Q328Z1
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Position
complement(3535728..3539369)
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AA seq
1213 aa
AA seq
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MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPG
ETDIALPAPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRR
LYFEHLYPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPLRYLATNSPQ
GPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTLHREAAGEFSGEITGVTDG
AGRHFRLVLTTQAQRAEEARQQASSGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDP
EYPDNLPAAPLVRYGWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEIRYR
YDRDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEGGLKRVVKKEHADGSV
TQSQFDAVGRLKAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHSQLTSATGP
DGLELRREYDESGRLIQETAHNGDITRYRYDNPHSDFPCATEDATGSRKTMTWSRYGQLL
SFTDCSGYVTRYDHDRLGQMTAVHREKGLSQYRAYDSRGQLIAVKDMQGHEMRYEYNAAG
DLTAVIAPDGSRNGTQYDAWGKAIRTTQGGLTRNMEYDAAGRVIRLTSENGSHTTFRYDV
LDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVKGETAERWRY
DERGWLSGMKLGDTPLVDFTRDRLHRETLRGFGRYELTTAYTPAGQLQRQHLNSLQYDRD
YTWNDNCELIRISSPRQTRSYSYSDSGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELH
PDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV
HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTT
IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLV
QMLDRLESEILADRVSEESRRWLASCGLTVAQMQSQMDPVYTPARKIHLYHCDHHGLPLA
LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR
YITQDPIGLKGGWNLYGYQLNPISDIDPLGLSMWEDAKSGACTNGLCGTLSAMIGPDKFD
SVMLPISRTCVFQ
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaaaccggcggcgcgtcagggcgacatgacgcagtatggcggtagcattgtc
cagggttcagccggggtgcgcatcggtgcccccaccggcgtggcctgttcggtgtgcccc
ggcggggtgacgtccggccatccggtcaatccgctgctgggtgcaaaggtccttcccggt
gaaaccgacatcgccctgcccgccccgctgccgttcattctctcccgcacctacagcagt
taccggacaaaaacgcccgcgccggtggggagcctcggccccggctggaaaatgcctgcg
gatatccgcttacagctgcgcgataacacactgatactcagtgataacggcggcagaagg
ctgtattttgagcacctgtatcccggtgaggacggttacagccgcagcgagtcactgtgg
ctggtgcgcggcggcgtggcgaaactggatgaaggtcaccggctggccgcactctggcag
gcgctgccggaagaactccgcttaagtccgcttcgttatctggcgacaaacagtccgcag
gggccgtggtggctgctcggctggtgtgagcgggtgccggaagcggatgaggtgctgcct
gcgccgctgccgccgtaccgggtactgaccgggctggtggaccgcttcgggcgcacacag
acgctccaccgcgaagccgccggtgaattcagcggcgaaatcaccggcgtgacggatggt
gccgggcgtcacttccggctggtactgaccacgcaggcgcagcgggcagaagaagcccgg
cagcaggcctcttccggcgggacggaaccgtccgcttttcctgataccctgccgggttac
accgaatatggccgggacaacggcatccgtctgtctgccgtgtggctgacgcacgacccg
gaatacccggacaacctgccagccgcgccgctggtgcgctatggctggacgccacgcggc
gaactggcggcggtgtatgaccgcagcaatacacaggtgcgcagctttacttacgatgat
aaataccggggccggatggtggcgcaccgtcacacgggccgaccggaaatccgttaccgt
tacgaccgcgacgggcgggtgacagaacagctaaacccggcaggtttaagctacacgtat
cagtatgagaaagaccgcatcaccatcaccgacagcctggaccgccgtgaagtcctgcac
acgcagggcgaaggtgggctgaagcgggtggtgaaaaaggaacacgcggacggcagcgtc
acgcagagtcagtttgatgcggtgggcaggcttaaggcacagacggatgccgcaggccgg
acgactgagtacagcccggatgtggtgacgggactcatcacgcgcatcaccacaccggat
ggcagggcatcggcattttactataaccaccacagccagttaacgtcagccaccgggcct
gacgggctggaattgcgccgggaatatgatgaatccggccgtctgattcaggaaactgca
cacaacggcgatatcacccgctaccgttatgataatccacacagtgacttcccctgcgca
acggaagatgccaccggcagccggaaaaccatgacgtggagccgttacggccagttgctg
agcttcaccgactgttccggttatgtaacccgttatgaccatgaccgcctcgggcagatg
acggcggtgcaccgcgagaaaggcctgagccagtaccgcgcatacgacagccgtggacag
ttaattgcggtgaaagacatgcagggccatgaaatgcggtatgaatacaacgctgccggt
gacctgaccgccgtcattgccccggacggcagcagaaacgggacacagtacgatgcgtgg
ggaaaggccatccgtaccacgcagggcggtctgacgcgcaatatggaatacgatgctgcc
ggacgggtcatccgcctgaccagtgaaaacggcagccacaccaccttccgttacgatgta
ctcgaccggctgatacaggaaaccggctttgacggccgcacacagcgttatcaccacgac
ctgaccggcaaacttatccgcagcgaggatgaggggctggtcacccactggcactatgac
gaagcagaccgcctcacgcaccgcaccgtgaagggtgaaaccgcagagcggtggcggtat
gacgaacgcggctggctgtcaggcatgaaactcggcgacacaccgctggtggatttcacc
cgcgaccgcctgcaccgggaaacgctgcgcggcttcggccgttatgaactcaccaccgct
tacacccctgccgggcagttacagcgtcagcacctgaacagcctgcagtatgaccgcgat
tacacctggaacgacaactgcgaactcatccgcatcagcagcccgcgccagacccggagt
tacagctacagcgactccggcaggctgaccggcgttcacaccacggcagcgaaccttgat
atccgcatcccgtatgccacagacccggcaggtaaccgcctgcccgacccggagctgcac
ccggacagcaccctcagcatgtggccggataaccgtatcgcccgtgacgcgcactatctt
taccggtatgaccgtcacggcagactgacagagaaaaccgacctcatcccggaaggggtt
atccgcacggatgatgagcgcacccaccggtaccattacgacagtcagcaccggctggtg
cactacacgcggacacaatatgcagagccgctggtcgaaagccgctatctttacgacccg
ctgggccgcagggtggcaaaacgggtgtggcgacgtgaacgggacctgacgggctggatg
tcgctgtcacggaaaccggaagtgacctggtacggctgggacggcgaccggctgaccaca
atacagaacgacagaacccgcatccagacgatttatcagccggggagcttcacgccactc
atcagggttgaaaccgccaccggtgagctggcgaaaacgcagcgccgcagcctggcggat
gcccttcagcagtccggcggcgaagacggtggcagtgtggtgttcccgccggtgctggtg
cagatgctcgaccggctggaaagtgaaatcctggctgaccgggtgagtgaggaaagccgc
cgctggctggcatcgtgcggcctgacggtggcgcagatgcaaagccagatggacccggta
tacacgccggcgcgaaaaatccacctgtaccactgcgaccatcacggcctgccgctggcg
cttgtcagcacggaaggggcaacagaatggtgcgcagaatacgatgaatggggcaacctg
ctgaatgaagagaacccgcaccagctgcagcagctcatccgcctgccggggcagcagtat
gatgaggagtccggcctgtattacaaccgccaccgctattatgacccgctgcaggggcgg
tatatcactcaggatccgattgggctgaaggggggatggaacctgtatggatatcaattg
aatccgatatcagacatcgaccccctgggtttatctatgtgggaggatgcaaaatcgggg
gcatgtactaatggtctttgcggcacactatccgctatgataggtccagataaatttgat
tcggtgatgcttccaattagtagaacatgtgtttttcaataa
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