Shigella dysenteriae Sd197: SDY_3879 Help Entry SDY_3879          CDS       T00306                                  Symbol polA Name (GenBank) PolA   KO K02335   DNA polymerase I [EC:2.7.7.7] Organism sdy  Shigella dysenteriae Sd197 Pathway sdy03030   DNA replication sdy03410   Base excision repair sdy03420   Nucleotide excision repair sdy03440   Homologous recombination Brite KEGG Orthology (KO) [BR:sdy00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     SDY_3879 (polA)    03410 Base excision repair     SDY_3879 (polA)    03420 Nucleotide excision repair     SDY_3879 (polA)    03440 Homologous recombination     SDY_3879 (polA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:sdy03032]     SDY_3879 (polA)    03400 DNA repair and recombination proteins [BR:sdy03400]     SDY_3879 (polA) Enzymes [BR:sdy01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      SDY_3879 (polA) DNA replication proteins [BR:sdy03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      SDY_3879 (polA) DNA repair and recombination proteins [BR:sdy03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA polymerase I      SDY_3879 (polA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      SDY_3879 (polA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH Prok-E2_E Motif Other DBs NCBI-ProteinID:  ABB63820 ShiBASE_China:  SDY3879 UniProt:  Q32A35 LinkDB All DBs Position complement(3609343..3612129) Genome browser AA seq 928 aa AA seqDB search MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYGEPEKIAGLSFRGAKTMAAKLEQNK EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN LKYDRGILANYGIELRGIAFDTRLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI ERNGVKIDPKVLHNHSEELTLRLAELERKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLSDIKSSNGARRAAAE RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI HQLMENCTRLDVPLLVEVGSGENWDQAH NT seq 2787 nt NT seq  +upstreamnt  +downstreamnt atggttcagatcccccaaaatccacttatccttgtagatggttcatcttatctttatcgc gcatatcacgcgtttcctccgctgactaacagcgcaggcgagccgaccggtgcgatgtat ggtgtcctcaacatgctgcgcagtctgatcatgcaatataaaccgacgcatgcagcggtg gtctttgacgccaagggaaaaacctttcgtgatgaactgtttgaacattacaaatcacat cgcccgccaatgccggacgatctgcgtgcacaaatcgaacccttgcacgcgatggttaaa gcgatgggactgccgctgctggcggtttctggcgtagaagcggacgacgttatcggtact ctggcgcgcgaagctgaaaaagccgggcgtccggtgctgatcagcactggcgataaagat atggcgcagctggtgacgccaaatattacgcttatcaataccatgacgaataccatcctc ggaccggaagaggtggtgaataagtacggcgtgccgccagaactgatcatcgatttccta gcgctgatgggtgactcctctgataacattcctggcgtaccgggcgtcggagaaaaaacc gcgcaggcattgctgcaaggtcttggcgggctggatacgctgtatggcgagccagaaaaa attgctgggttgagcttccgtggcgcgaaaacaatggcagcgaagctcgagcaaaacaaa gaagttgcttatctctcataccagctggcgacgattaaaaccgacgttgaactggagctg acctgtgaacaactggaagtgcagcaaccggcagcggaagagttgttggggctgttcaaa aagtatgagttcaaacgctggactgctgatgtcgaagcgggcaaatggttacaggccaaa ggggcaaaaccagccgcgaagccacaggaaaccagtgttgcagacgaagcaccagaagtg acggcaacggtgatttcttatgacaactacgtcaccatccttgatgaagaaacactgaaa gcgtggattgcgaagctggaaaaagcgccggtatttgcatttgataccgaaaccgacagc cttgataacatctctgctaacctggtcgggctttcttttgctatcgagccaggcgtagcg gcatatattccggttgctcatgattatcttgatgcgcccgatcaaatctctcgcgagcgt gcactcgagttgctaaaaccgctgctggaagatgaaaaggcgctgaaggtcgggcaaaac ctgaaatacgatcgcggtattctggcgaattacggcattgagctgcgtgggattgcgttt gataccaggctggagtcctacattctcaatagcgttgccgggcgtcacgatatggacagc ctcgcggaacgttggttgaagcacaaaaccataacttttgaagagattgcgggtaaaggc aaaaatcaactgacctttaaccagattgccctcgaagaggccggacgttacgccgccgaa gatgcagatgtcaccttgcagttgcatctgaaaatgtggccggatctgcaaaaacacaaa gggccgttgaacgtcttcgagaatatcgaaatgccgctggtgccggtgctttcacgcatt gaacgtaacggtgtgaagatcgatccgaaagtgctgcacaatcattctgaagagctcacc cttcgtctggctgagctggaaaggaaagcgcatgaaattgcaggtgaggaatttaacctt tcttccaccaagcagttacaaaccattctgtttgaaaaacagggcattaaaccgctgaag aaaacgccgggtggcgcgccgtcaacgtcggaagaggtactggaagaactggcgctggac tatccgttgccaaaagtgattctggagtatcgtggtctggcgaagctgaagtcgacttac accgacaagctgccgctgatgatcaacccgaaaaccgggcgtgtgcatacctcttatcac caggcagtaactgcaacgggacgtttatcgtcaaccgatcctaacctgcaaaacattccg gtgcgtaacgaagaaggtcgtcgtatccgccaggcgtttattgcgccagaggattatgtg attgtctcagcggactactcgcagattgaactgcgcattatggcgcatctctcgcgtgac aaaggcttgctgaccgcattcgcggaaggaaaagatatccaccgggcaacggcggcagaa gtgtttggtttgccactggaaaccgtcaccagcgagcaacgccgtagcgcgaaagcgatc aactttggtctgatttatggcatgagtgctttcggtctggcgcggcaattgaacattcca cgtaaagaagcgcagaagtacatggacctttacttcgaacgctaccctggcgtgctggag tatatggaacgcacccgtgctcaggctaaagagcagggctacgttgaaacgctggacgga cgccgcctgtatctgtcggatatcaaatccagcaatggtgctcgtcgtgcagcggctgaa cgtgcagctattaacgcgccaatgcagggaaccgccgccgatattatcaaacgggcgatg attgccgttgatgcgtggttacaggctgagcaaccgcgtgtacgtatgatcatgcaggta cacgatgaactggtatttgaagtccataaagatgatgtcgatgccgtcgcgaagcagatt catcaactgatggaaaactgtacccgtttggatgtgccgttgctggtggaagtggggagt ggcgaaaactgggatcaggcgcactaa

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