Shigella dysenteriae Sd197: SDY_4045
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Entry
SDY_4045 CDS
T00306
Symbol
yibO
Name
(GenBank) putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
KO
K15633
2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:
5.4.2.12
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00010
Glycolysis / Gluconeogenesis
sdy00260
Glycine, serine and threonine metabolism
sdy00680
Methane metabolism
sdy01100
Metabolic pathways
sdy01110
Biosynthesis of secondary metabolites
sdy01120
Microbial metabolism in diverse environments
sdy01200
Carbon metabolism
sdy01230
Biosynthesis of amino acids
Module
sdy_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
sdy_M00002
Glycolysis, core module involving three-carbon compounds
sdy_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SDY_4045 (yibO)
09102 Energy metabolism
00680 Methane metabolism
SDY_4045 (yibO)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SDY_4045 (yibO)
Enzymes [BR:
sdy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.2 Phosphotransferases (phosphomutases)
5.4.2.12 phosphoglycerate mutase (2,3-diphosphoglycerate-independent)
SDY_4045 (yibO)
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Gene cluster
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Motif
Pfam:
Metalloenzyme
iPGM_N
PPR_long
Sulfatase
Phage_TTP_12
SGSH_C
PglZ
Motif
Other DBs
NCBI-ProteinID:
ABB63963
ShiBASE_China:
SDY4045
UniProt:
Q329P2
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All DBs
Position
3781041..3782585
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AA seq
514 aa
AA seq
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MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQ
MGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRVFFANPVLTGAVDKAKSAGKAVHIMGLLS
AGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAALGKGR
VASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADTAVAGLQAAYARDENDEFVKATV
IRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAA
DIKTAVAYPPASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILI
NSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEA
LDHCVDEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKA
VEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtttctaaaaaacctatggtactggtgattctggatggctatggctatcgcgaa
gaacagcaggataacgccatttttagtgctaaaaccccggtaatggatgcactgtgggcc
aatcgtccgcataccctgatcgacgcttccggtctggaagtcggtctgccagaccgtcag
atgggtaactccgaagtaggccacgttaacctgggtgccggccgcatcgtgtatcaggac
ctgactcgtctggacgttgaaatcaaagatcgcgttttctttgctaatccggtgctgact
ggcgcggtagataaagcgaaaagcgcaggtaaagcagtacacattatgggtctgctctcc
gcaggcggcgtacacagccacgaagatcacatcatggcgatggtagaactggcagctgaa
cgcggcgcagaaaaaatctacctgcacgcattccttgacggtcgcgacactccgccacgc
agtgctgaatcctcgctgaaaaaattcgaagagaaatttgctgcgctgggtaaaggccgc
gtagcgtccatcattggtcgttactacgcgatggaccgcgataaccgttgggatcgcgtt
gaaaaagcttatgacctgctgactctggcgcagggtgagttccaggccgataccgccgtt
gctggtttgcaggctgcttatgctcgcgacgaaaacgacgagttcgtgaaagcgaccgtc
attcgtgcagaaggtcagccagacgcggcaatggaagacggcgatgcgctgattttcatg
aacttccgtgctgaccgcgcgcgtgaaatcactcgtgctttcgtgaacgctgatttcgat
ggcttcgcgcgtaagaaagtggttaacgtggatttcgtaatgctgaccgaatacgccgct
gacatcaaaactgcggttgcttacccaccagcttccctggttaacaccttcggcgagtgg
atggcgaaaaacgacaaaactcagctgcgaatttccgaaaccgaaaaatatgcccacgtc
actttcttctttaacggtggtgtagaagagtcgtttaaaggcgaagaccgcattctgatc
aactcaccgaaagtggcaacttacgatctgcaaccggaaatgagctccgcagagctgacc
gaaaaactggttgcggcaatcaagagcggcaaatacgacaccatcatctgtaactacccg
aacggtgacatggtaggtcacaccggggtgatggaagcagcagttaaagccgttgaagcg
ctggatcactgcgtggatgaagttgcgaaagcggttgagtctgtaggtggacaactgctg
atcaccgctgaccacggtaacgctgaacagatgcgcgatccggcaacgggtcaggcgcac
acagcgcacaccaacctgccagttccgctgatttacgttggcgataagaacgtgaaagcg
gttgaaggcggcaaactttctgacatcgcgccgaccatgttgtcgctgatgggtatggaa
atcccgcaagagatgactggtaagccgctgttcatcgtggaataa
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