Shigella dysenteriae Sd197: SDY_4065
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Entry
SDY_4065 CDS
T00306
Symbol
mutM
Name
(GenBank) formamidopyrimidine DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SDY_4065 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdy03400
]
SDY_4065 (mutM)
Enzymes [BR:
sdy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SDY_4065 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SDY_4065 (mutM)
DNA repair and recombination proteins [BR:
sdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SDY_4065 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ABB63983
ShiBASE_China:
SDY4065
UniProt:
Q329M2
LinkDB
All DBs
Position
complement(3802612..3803421)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLL
LELPEGWIIIHLGMSGSLRILTEGLPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWAKEL
EGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRVCGTPIVATKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagttgaaaccagccgtcgcggcatagaaccgcatcttgttggt
gcaaccattcttcatgcggtggtgcgcaacggacgcttgcgctggccggtttcagaagaa
atctaccgtttaagcgatcaaccagtgcttagtgtacagcgccgcgctaaatatctgctg
ctggagctgcctgagggctggattatcattcatctggggatgtctggcagtctgcgcata
cttacggaaggccttccccctgaaaagcatgaccatgttgatttggtgatgagcaatggc
aaagtgctgcgctacaccgacccgcgccgctttggcgcctggctgtgggccaaagagctg
gaaggccacaatgtgctggcacatcttgggccggagccacttagcgatgatttcaatggc
gaatacttgcatcagaagtgcgcgaagaaaaagacggcgattaagccctggctgatggat
aacaagctggtagtaggagtggggaatatctacgccagtgaatcactgtttgcagcgggg
atccatccggatcggctggcgtcatcactgtcgctggcagagtgcgaattgttagctcgg
gtgattaaagctgtattgctacgttcaattgagcagggcggcacgacgctgaaagatttt
ctgcaaagcgacggtaagcctggctatttcgctcaggaactgcaggtttacgggcgaaaa
ggcgagccgtgtcgagtgtgcggtacgccgattgtggcgactaaacatgcgcaacgggcg
acgttttattgtcggcagtgccagaagtaa
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