Shigella dysenteriae Sd197: SDY_4260
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Entry
SDY_4260 CDS
T00306
Symbol
treR
Name
(GenBank) repressor of treA,B,C
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdy03000
]
SDY_4260 (treR)
Transcription factors [BR:
sdy03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SDY_4260 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_23
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
HTH_28
AAA_18
HTH_26
HTH_Crp_2
CENP-B_N
TrmB
MarR
HHH
HTH_17
HTH_AraC
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ABB64161
ShiBASE_China:
SDY4260
UniProt:
Q328U4
LinkDB
All DBs
Position
complement(3991860..3992807)
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AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQATCQLIAQVT
GRSEPQQIIIPATLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccatcaaagacatcgcgcgcttaagcggcgtggggaaatctaca
gtttcccgggtgctgaataacgaaagcggcgtgagccagcgtacgcgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgctctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgcctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagcgttctatgaacaaggttacgatccaatcatgatggaaagt
cagttttccccgcaattagttgccgaacatttgggggtgctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttaccggcataaccgaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaagatcctgatgcaacggctgtatgaccaggggcatcgcaatatcagttat
ctcggcgtgccgcatagtgacgtgacaaccggtaagcgacgtcacgaagcctacctggcg
ttctgcaaagcgcataaactgcatcccgttgccgccctgccaggccttgctatgaagcaa
ggctatgagaacgtagcaaaagtgattacgcctgaaactaccgccttactgtgcgcaacc
gacacgctggcacttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtcggtaatacgccattaatgaaattccttcatccggagatcgtcaccgta
gatcctggttacgccgaagctggacgccaggcgacctgccagttgatcgcgcaggtaacc
ggacgcagcgaaccgcaacaaatcatcatccccgccaccctgtcctga
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