Shigella dysenteriae Sd197: SDY_4288
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Entry
SDY_4288 CDS
T00306
Symbol
yjgB
Name
(GenBank) putative oxidoreductase
KO
K12957
alcohol/geraniol dehydrogenase (NADP+) [EC:
1.1.1.2
1.1.1.183
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00010
Glycolysis / Gluconeogenesis
sdy00620
Pyruvate metabolism
sdy00907
Pinene, camphor and geraniol degradation
sdy01100
Metabolic pathways
sdy01110
Biosynthesis of secondary metabolites
sdy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SDY_4288 (yjgB)
00620 Pyruvate metabolism
SDY_4288 (yjgB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SDY_4288 (yjgB)
Enzymes [BR:
sdy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.2 alcohol dehydrogenase (NADP+)
SDY_4288 (yjgB)
1.1.1.183 geraniol dehydrogenase (NADP+)
SDY_4288 (yjgB)
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GFIT
Motif
Pfam:
ADH_zinc_N
ADH_N
AlaDh_PNT_C
ADH_zinc_N_2
2-Hacid_dh_C
NAD_binding_2
ThiF
RS_preATP-grasp-like
ApbA
Oxidored_nitro
Shikimate_DH
Sacchrp_dh_NADP
F420_oxidored
ETF
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ABB64188
ShiBASE_China:
SDY4288
UniProt:
Q328R7
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Position
complement(4018489..4019550)
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AA seq
353 aa
AA seq
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MLYTSQTTPEKDQKMSMIKSYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLS
MIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGN
QINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHI
TATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALK
ALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSA
TGTPYELRKLMRFAARSKVAPTTELFPMSKINDTIKHVRDGKARYRVVLKADF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctctacacttcccagaccacaccagagaaggaccaaaaaatgtcgatgataaaaagc
tatgccgcaaaagaagcgggtggcgaactggaagtttatgagtacgatcccggtgaactg
aagccacaagatgttgaagtgcaggtggattactgcgggatctgtcattccgatctgtca
atgatcgataacgaatggggattttcacaatatccactggttgccgggcatgaggtgatt
ggtcgcgtagtggcgctcgggagtgccgcgcaggataaaggtttgcaggtcggtcagcgt
gtcgggattggctggacggcacgcagctgcgggcattgcgatgcctgtattagcggtaat
cagatcaactgcgagcaaggtgcggtgccgacgattatgaatcgcggtggctttgccgag
aagttgcgtgcggactggcaatgggtgattccactgccagaaaatatcgacattgaatct
gccggaccgctgttgtgcggcggtatcacggtctttaaaccgctgttgatgcaccatatc
actgccaccagccgcgttggggtaattggtattggcgggctggggcatatcgctataaaa
cttctgcacgcaatgggatgcgaggtgacagcctttagttctaatccggcgaaagagcag
gaagtgctggcgatgggtgccgataaagtggtgaatagccgcgatccacaggcactgaaa
gcactggcggggcagtttgatctcattatcaacaccgtcaacgtcagcctcgactggcag
ccttattttgaggcgctgacgtacggcggtaatttccatacggtcggtgcagttctcacg
ccgctgtctgttccggcctttacgttaattgcgggcgaccgcagcgtctctggttctgct
accggcacgccttatgagctgcgaaagctgatgcgctttgccgcccgtagcaaggttgcg
ccgaccaccgaactgttcccgatgtcgaaaattaacgacaccatcaagcatgtgcgcgac
ggtaaggcgcgttaccgcgtggttctgaaagctgacttctga
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