Shigella dysenteriae Sd197: SDY_4383
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Entry
SDY_4383 CDS
T00306
Symbol
cpdB
Name
(GenBank) 2':3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00230
Purine metabolism
sdy00240
Pyrimidine metabolism
sdy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SDY_4383 (cpdB)
00240 Pyrimidine metabolism
SDY_4383 (cpdB)
Enzymes [BR:
sdy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
SDY_4383 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
SDY_4383 (cpdB)
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Ortholog
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GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
DUF7436
Motif
Other DBs
NCBI-ProteinID:
ABB64270
ShiBASE_China:
SDY4383
UniProt:
Q328I5
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All DBs
Position
complement(4103167..4105116)
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AA seq
649 aa
AA seq
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MEASPFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASL
INDARNEVKNSVLVDNGDLIQGGPLADYMSAKGLKAGDVHPVYKALNTLDYTVGTLGNHE
FNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIG
VVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAE
NSVYYLSEIPGVNAIMFGYAHAVFPGKDFADIEGADIAKGTLNGVPEVMPDMWGDHLGVV
DLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGK
SADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDP
ASYVEVEKGLLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSL
INWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFL
VATNNYRAYGGKFACTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPI
AGDKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcatcaccgtttagcgcaacgctcctagccacgctgattgccgccagtgtgaat
gcagcgacggtcgatctgcgtatcatggaaaccactgatctgcatagcaacatgatggat
ttcgattattacaaagacaccgccacggaaaaattcggactggtacgtacggcaagcctg
attaacgatgcccgcaatgaagtgaaaaacagcgtactggtcgataacggcgatttgatt
caagggggtccgctggccgattacatgtcggcgaaaggattaaaagcaggtgatgttcat
ccggtttataaggcactgaatacgctggattatacggtcggtacactcggcaatcatgaa
tttaactacggtctggattacctgaaaaatgcgctggcgggagcgaaattcccttatgta
aatgccaacgtcattgacgccagaaccaaacagccaatgtttacaccgtatttaattaaa
gataccgaagtggtcgataaagacggaaaaaaacagacgctgaagattggctatattggc
gtcgtgccgccgcaaatcatgggctgggataaagctaatttatccggaaaagtgacggtg
aatgatattaccgaaaccgtgcgcaaatacgtgcctgaaatgcgcgagaaaggtgccgat
gtcgttgtcgttctggcgcattccgggctgtctgccgatccgtataaagtaatggcggaa
aactcagtttattacctcagtgaaattccgggcgttaacgccattatgtttggctatgct
cacgccgttttcccgggtaaagattttgctgatatcgaaggggctgatatcgccaaaggc
acgctgaatggtgttccggaggtaatgccagacatgtggggcgatcatcttggggtggtc
gacttacaactcagtaatgacagcggtaaatggcaggtgacgcaggcgaaagcggaagct
cggccgatttacgacatcgccaataaaaaatccctcgcggcggaagacagcaagctggta
gaaacactcaaagccgatcacgatgccacacgccagttcgtcagcaagccaatcggtaaa
tctgccgacaacatgtatagctatctggcgctggtgcaggacgatccgaccgtgcaagta
gtgaacaacgcgcaaaaagcgtatgtcgaacattacattcagggcgatccggatctggca
aaactgccggtgctttcagctgccgcaccgtttaaagttggtggtcgcaaaaatgacccg
gcaagctatgtggaggtggaaaaaggcctgttgaccttccgtaatgccgccgatctttat
ctctaccccaatacgctgattgtggtgaaagccagcggtaaagaggtgaaagagtggctg
gagtgctccgccggacagtttaaccagattgatcctaacagcacgaaaccacagtcactc
atcaactgggatggtttccgcacttataactttgatgttattgatggtgtgaattatcag
attgatgttacccagcccgcccgttatgacggcgagtgccagatgattaatgccaatgcg
gaaaggattaagaacctgacctttaatggcaagccgattgatccgaacgccatgttcctc
gttgccaccaataactatcgcgcttacggcggcaaatttgcctgtacgggcgacagccat
atcgcttttgcttcaccggatgagaaccgctcggtgctggcagcgtggattgctgatgag
tcgaaacgtgcgggggaaattcacccggcggcagataacaactggcgtttagcaccgata
gctggcgataagaaactggatatccgtttcgaaacctctccgtcagataaagccgcagca
tttattaaagagaaagggcagtatccgatgaataaagtcgcgaccgatgatatcgggttt
gcgatttatcaggtggatttgagtaagtaa
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