Shigella dysenteriae Sd197: SDY_4397
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Entry
SDY_4397 CDS
T00306
Symbol
frdB
Name
(GenBank) fumarate reductase, anaerobic, iron-sulfur protein subunit
KO
K00245
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00020
Citrate cycle (TCA cycle)
sdy00190
Oxidative phosphorylation
sdy00620
Pyruvate metabolism
sdy00650
Butanoate metabolism
sdy00720
Other carbon fixation pathways
sdy01100
Metabolic pathways
sdy01110
Biosynthesis of secondary metabolites
sdy01120
Microbial metabolism in diverse environments
sdy01200
Carbon metabolism
sdy02020
Two-component system
Module
sdy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdy_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SDY_4397 (frdB)
00620 Pyruvate metabolism
SDY_4397 (frdB)
00650 Butanoate metabolism
SDY_4397 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
SDY_4397 (frdB)
00720 Other carbon fixation pathways
SDY_4397 (frdB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SDY_4397 (frdB)
Enzymes [BR:
sdy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SDY_4397 (frdB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_7
Fer4_9
Fer4_16
Fer4_18
Fer4
Fer4_2
Fer4_4
Fer4_21
Fer2
Fer4_6
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
ABB64284
ShiBASE_China:
SDY4397
UniProt:
Q328H1
LinkDB
All DBs
Position
complement(4113723..4114457)
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AA seq
244 aa
AA seq
DB search
MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRM
AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY
IIGNSRTSDQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLTPEFIGPAAITLAHRY
NEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIAT
LKPR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatgaaaaacctgaaaattgaggtggtgcgctataacccggaagtcgatacc
gcaccgcatagcgcattctatgaagtgccttatgacgcaactacctcattactggatgcg
ctgggctacatcaaagacaacctggcaccggacctgagctaccgctggtcctgccgtatg
gcgatttgtggttcctgcggcatgatggttaacaacgtgccaaaactggcatgtaaaacc
ttcctgcgtgattacaccgacggtatgaaggttgaagcgttagctaacttcccgattgaa
cgcgatctggtggtcgatatgacccacttcatcgaaagtctggaagcgatcaaaccgtac
atcatcggcaactcccgcacctcggatcagggtactaacatccagaccccggcgcagatg
gccaagtatcaccagttctccggttgcatcaactgtggtctgtgctacgccgcgtgcccg
cagtttggcctgaccccagagttcatcggtccggctgccattacgctggcgcatcgttat
aacgaagatagccgcgaccacggtaagaaggagcgtatggcgcagttgaacagccagaac
ggcgtatggagctgtactttcgtgggctactgctccgaagtctgcccgaaacacgtcgat
ccggctgcggccattcagcagggcaaagtagaaagttcgaaagactttcttatcgcgacc
ctgaaaccccgctaa
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