Shigella dysenteriae Sd197: SDY_P117
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Entry
SDY_P117 CDS
T00306
Symbol
traD
Name
(GenBank) putative membrane protein
Organism
sdy
Shigella dysenteriae Sd197
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
TraG-D_C
T4SS-DNA_transf
AAA_16
AAA_22
Zeta_toxin
EAD7
TsaE
Motif
Other DBs
NCBI-ProteinID:
ABB64630
ShiBASE_China:
SDYP117
UniProt:
Q326X8
LinkDB
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Position
pSD1_197:93565..95079
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AA seq
504 aa
AA seq
DB search
MSVKLRLPQITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKEVARMLKKGGEDSDIRIG
DLPIIRDSEIKNFCLHGTVGAGKSEVIRRLANYARKRGDMVVIYDRSCEFVKSYYDPSID
NILNPLDVRCAAWDLWKECLTQPDFDNVANTLIPMGTKEAPFWQGSGRTIFAEAAYLMRN
DPNRSYSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQ
RIEHNGESFTIRDWMRGVREDKKNGWLFISSNADTHASLKPVISMWLSIAIRGLMAMGGN
RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDV
MNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYS
DIQSLPDLTCYVTLPGPYPAVKLSLKYQARPKVAPEFIPREINPENGEPSECRACCKGSR
RSSDGQPLRTGCPGGCIRRGRDSG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgttaaactcaggctacctcagatcaccttctttgttgtttcctggattctgggg
cgtcagggtaaacaacagagcgaaaatgaagtcacaggtggtcgtcaactgacggataac
ccgaaagaggtagcccggatgctgaaaaaaggcggagaggactcggatatccggattggc
gacctgccgattatccgggattctgaaatcaagaacttttgtctgcacggcaccgtcggg
gccggtaagtcggaagttatccgacgtctggccaactacgcccgtaaacgtggcgacatg
gtggtgatttatgaccgttcgtgtgagtttgttaaaagttactatgatccctccatcgat
aatatcctgaatccgctggatgtacgctgtgccgcctgggacttgtggaaggagtgtctg
acacagccggattttgataatgtcgcaaacacgctgatcccaatgggaacaaaagaggcc
ccgttctggcagggttcaggacgtaccattttcgcggaagcggcgtacctgatgcgtaat
gaccccaaccgcagctacagcaaactggtggacacactgctttccatcaaaattgaaaaa
ctgcgtaccttcctgcgtaattcaccggcggccaacctggtggaagagaaaatcgagaaa
acggcgatttccatccgtgctgtgctgaccaactacgtgaaagccatccgttacctgcag
cggattgagcataacggtgagtccttcactattcgtgactggatgcggggtgtccgtgaa
gataagaaaaacggctggctgtttatctcgtcaaatgctgacacccatgcttccctgaaa
ccggtgatctccatgtggctgtccatcgccattcgtggcctgatggcgatgggggggaac
cgtaaccgtcgtgtgtggttcttctgtgacgagttgcccacgctgcacaaactgccggac
ctggtggagatcctgccggaagcccgtaagttcggtggttgttatgtgttcggtatccag
tcctatgcccagctggaagatatctacggtgagaaagcggcggccacgctgtttgacgtc
atgaacacccgtgcttttttccgttccccgagccataagattgcagagttcgctgccggt
gagattggtgagaaagagcacctgaaagccagcgagcagtattcctacggtgctgacccg
gtacgtgacggggtatcgaccggtaaggatatggagcgtcagacgctggtcagttattcc
gacattcagtctctgccggatctgacctgctatgtcactctgcccggaccgtatccggca
gtcaaactctcactgaaatatcaggcacgaccgaaggttgctccggagtttattccgcgt
gaaatcaatccggaaaatggagaaccgtctgagtgccgtgcttgctgcaagggaagcaga
aggtcgtcagatggccagcctcttcgaaccggctgtcccggaggttgtatccggagagga
cgtgactcaggctga
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