Symmachiella dynata: Mal52_03460
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Entry
Mal52_03460 CDS
T06944
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sdyn
Symmachiella dynata
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdyn03016
]
Mal52_03460 (rnd)
Enzymes [BR:
sdyn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mal52_03460 (rnd)
Transfer RNA biogenesis [BR:
sdyn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mal52_03460 (rnd)
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QDU41891
UniProt:
A0A517ZHE8
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All DBs
Position
complement(447158..448339)
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AA seq
393 aa
AA seq
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MSDELIVKQEDFAELCDHIRQSGLVAFDTEFVSEYTFRPQLCLLQFATADRQVAVDPFKL
EDLTPWWDLMTDEETTIVVHGGREEVRFCVNLAGKRPQKLIDVQIAQGLIGLSFPLGHTA
LLNRVLGVEVYGKETRTDWRRRPLSDKQVHYAIEDVRHLLDVWRTQQATLEKRGRSSWAV
DEFERMIDEIDAERTRENWRRLSGVNSLRSRDLAVARELYEWRSNEAEKRDRPARKILRD
DLLIDVAKRQPQTVNDLLATRDMNRGPFYRDMAPAILEAIARGRDLPKAQWPKQIRKEKE
RDEQILGKLLSIALANRCAEQDVSMQLVGTTSDLKQLVRWHVYDKENGTVPRIAQGWRAE
VCGDLLTDLLDGKITMRVGDLQSNHPIVFDEPD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgagttaatcgtcaagcaagaggattttgctgaactctgcgaccatattcgc
caatcgggcctcgtggcgtttgatacagaattcgtctcggaatacacgttccggccacaa
ctctgcttgctgcaattcgccacggcggatcgtcaggtcgcggtcgatccgtttaagctc
gaagacctcaccccctggtgggatttgatgaccgatgaggaaacgaccatcgttgtccac
ggcggtcgcgaagaggtccgtttctgcgtcaatctggccggcaagcgaccccaaaagcta
attgatgtgcaaatcgcgcagggattgatcggactgagctttccgctgggccataccgct
ttactcaaccgcgtcttaggtgtcgaagtttatggcaaggagacacgcaccgattggcgc
cgtcgtccgctatccgataaacaagtgcactacgccattgaggacgtgcggcacttgctg
gatgtctggcgaacacaacaagccacactcgaaaaacggggacggagtagctgggcggtt
gacgagtttgaacgcatgatcgatgaaatcgacgccgagcggactcgggaaaactggcgg
cgattgtcgggcgtcaattcgctccgttcccgcgatttggccgtcgcccgcgaattgtac
gaatggcgcagcaacgaggctgagaaacgggaccgtccggctcggaaaatccttcgtgac
gacctattgatcgatgtcgccaaacggcaaccacaaacggtcaatgacctgctggcgacg
cgggacatgaaccgcggcccgttttaccgggacatggcgccggccatcctcgaagcgatc
gcacgcggacgcgatcttcccaaagcccagtggcccaaacaaatccgcaaggaaaaggaa
cgggacgaacagatcttgggcaaactgctgtccatcgcgttggccaatcgctgcgcggaa
caagacgtctccatgcaactggtcggcacgacctcagatctcaagcaattggtccgctgg
catgtttacgacaaggaaaacggcaccgtcccccgcatcgcccaaggctggcgcgccgaa
gtctgcggcgacctgctaaccgacctcctagacggcaagatcaccatgcgcgtcggcgac
ctgcaatccaaccacccaatcgtattcgacgaacccgattga
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