Symmachiella dynata: Mal52_07910
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Entry
Mal52_07910 CDS
T06944
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal52_07910 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdyn03019
]
Mal52_07910 (recQ)
03400 DNA repair and recombination proteins [BR:
sdyn03400
]
Mal52_07910 (recQ)
Enzymes [BR:
sdyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mal52_07910 (recQ)
Messenger RNA biogenesis [BR:
sdyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mal52_07910 (recQ)
DNA repair and recombination proteins [BR:
sdyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mal52_07910 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF8598
Motif
Other DBs
NCBI-ProteinID:
QDU42335
UniProt:
A0A517ZIN5
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All DBs
Position
984416..986272
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AA seq
618 aa
AA seq
DB search
MHMDANTAAPEDVLKQYWGYDDFRPLQREAIDCVLAGRDSVVVLPTGGGKSLCFQIPAMC
MPGMAVVVSPLISLMKDQVDALRSNGVPAACVNSSLSYQERIQVSEEIRSGQLKLLYAAP
ERLLMENTIEFLQESNVSFVAIDEAHCVSEWGHDFRPDYRQLRTLKRAFPNIGIHTYTAT
ATEIVREDIAKQLDLHEPEVHIGSFDRPNLIYKIERRSGGIKQIQEVIDRHPGESGIVYC
ISRRKVDETTSELNELGYRALPYHAGMPDTQRKDNQDAFINERCDIIVATVAFGMGIDKS
NVRYVIHSQLPKSLEAYQQESGRAGRDGLEAECCLFYSTGDFNTWSRLLNQSGDLKARDV
SIDSLGMMLDFCTGVTCRHRAIVEHFGQKLAVDSCNACDVCMGDIELVDDALVIGQKILS
CVIRLEQRFGGEYTAGVLKGSQERRLLDNGHDQLSTYGLLAEESQRTIRDWIEQLVSQGY
LSRYGEFNQLQVSENGRQVLRGEVTPRLSKPLKKAKKSRSESKSKVAEESWEGVDRGLFD
VLRTIRKAIAEEKEVPAYVVFGDAALRDMALRRPTTLEGFLDVRGVGEKKCKDYGEEFVG
AISAYCREHDVTADVDVD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcacatggatgccaacactgccgctcctgaggatgtcctcaagcaatactggggctac
gacgactttcgcccgctacagcgcgaggcgatcgactgtgtgcttgccgggcgggattcg
gtggttgtgttgccgaccggcggcggaaaatcgctctgttttcaaattcccgcgatgtgc
atgcctggtatggcggtcgtggtttcgccgctcatctcgctgatgaaggaccaagtcgac
gcgctgcgttccaacggcgtcccggctgcttgcgtgaacagttcgctctcctatcaggag
cgtattcaggtctccgaagaaattcgcagcgggcagttgaagctgctgtatgcggcgccg
gaacggttgttgatggaaaacacgatcgaattcctgcaggagtccaacgtctcgttcgtc
gccatcgacgaagcgcattgtgtgagcgaatggggacacgactttcggccggactaccgt
caattacggacactcaaacgggcctttcccaatatcggcatccatacctataccgcgacg
gcgaccgaaatcgtccgcgaggatattgccaaacaactcgatttgcatgagccggaggtc
cacattggatcgtttgaccgcccgaatctgatttataaaatcgaacgccgatcgggcggg
atcaaacagattcaggaagtcatcgaccggcatcccggcgagtcggggattgtgtattgc
atcagccgccgcaaggtggatgaaacaacgtcggagctcaacgagttgggttaccgcgcc
ttgccctatcatgcagggatgcccgatacgcagcgaaaagacaatcaggatgcgttcatc
aacgaacgctgcgacatcatcgtggcgacggtcgcctttggtatgggaatcgacaagtcg
aatgtccgctatgtgattcattcgcaacttcccaaatcgctggaagcgtatcaacaggaa
agtggccgcgccgggcgggatggcttggaggcggagtgttgtctgttttattccactggc
gatttcaacacgtggtcgcggttgctcaatcagtcgggggacctcaaagcgcgagacgtg
tcgattgattcgctggggatgatgctcgatttctgcaccggtgtcacgtgtcgacaccgc
gcaatcgtggaacactttgggcaaaagctagctgtggattcctgcaatgcgtgcgacgtc
tgtatgggggacattgaactggtcgacgacgcgctggtcatcggtcaaaaaatcctctcc
tgtgtgattcgcctcgaacaacgtttcggcggcgaatataccgcgggcgtgttaaaaggt
tcgcaggagcgtcgcttgctcgacaacgggcacgatcaattgagcacctatggtttactc
gccgaggaatcgcagcgaacgattcgtgactggatcgagcagttggtttcgcaggggtat
ttatcgcgttacggcgaattcaaccaattgcaggtgagtgaaaatgggcggcaagtgttg
cggggcgaagtgacccctcgattgagcaagccgctcaagaaggctaaaaaatccaggtcc
gaatccaagtccaaagtcgccgaggaatcttgggaaggcgtcgatcgcggactgttcgat
gtcctgcggaccattcgcaaggcgatcgctgaagaaaaagaggtccccgcctacgtcgtc
ttcggtgacgccgccctgcgcgacatggcgctgcgccgcccgaccacactggaaggattt
ctagacgtccgcggcgtcggcgaaaagaagtgcaaggactacggcgaggaattcgtcggc
gcgatcagcgcgtattgccgagaacacgatgtgactgcggatgttgatgtggattag
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