KEGG   Symmachiella dynata: Mal52_14860
Entry
Mal52_14860       CDS       T06944                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sdyn  Symmachiella dynata
Brite
KEGG Orthology (KO) [BR:sdyn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdyn03400]
    Mal52_14860
Enzymes [BR:sdyn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mal52_14860
    5.6.2.6  RNA 3'-5' helicase
     Mal52_14860
DNA repair and recombination proteins [BR:sdyn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Mal52_14860
SSDB
Motif
Pfam: DEAD_assoc DEAD WH_Lhr WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 HTH_20 AAA_25 DEXQc_Suv3 PhoH
Other DBs
NCBI-ProteinID: QDU43015
UniProt: A0A517ZKR9
LinkDB
Position
complement(1835180..1839652)
AA seq 1490 aa
MHEIMSTLHNFHPLIQQWFRSRFAAPTEPQQRGWPFIADGQHTLIAAPTGSGKTLTAFLA
AIDRLLKLALAGELEQRTYVVYVSPLRALSNDMHRNLEDPLNEIMALAAENGIDVPPIRV
GLRTGDTKSSQRAALVRKPPHILVTTPESLYLMLTAEKSRAKLQAVETVIVDEIHALVSD
KRGSHLSLTLERLQAWCERPFQRVGLSATQRPIEDTARFLVGFHERNAEQLPCEIIDVGH
QRELDLAIEVPPSELGAVCMHEQWAEVNERIAELINNHRSTLIFVNTRRMAERITHLLTE
LMGEDAVSSHHGSLAAKFRLETEQRLKEGKLKAVVATASLELGIDIGYIDLVIQIGSPRS
IATFLQRVGRSGHSLGLIPKGRLFALTRDELYECMALLRAVRGGRLDRIPIPTAPLDILA
QQIVAEVSAEEWGTDELFAAFRRAAPYHELSRADFDKVVEFLSEGVAHANGRSRVFLHHD
QVNRRIRPRPGARMAATMNGGAIGEVASYRVIAEPERTVVGTLDEEFAAESQAGDIFLLG
NTSWRIQHVRGGEVTVFDAHGAPPSIPFWRGEAPGRTLELSEEVSRLREELEPLLEDEAA
AQQWLIGETDITPAAAEQAVTYAAAQKAALGLLPTCKRVVFERFFDESGGMQMLIHAPFG
GRINTAWGMSLRKRFCRSFDFELQATADDNGLILSLGPQHSFPLESMFGMLNPNNARNLL
EQALLAVPTFQIRWRWNVTRSLLVARMNNGKKVPPPLQRFRADDLLTAVFPKLTGCQENI
TGDHEIPDHPLIRQTMEDCLFEAMDIAGLENVLTGVQRGDITYVARDTREPSPFCYELLN
ASPYAFLDGGEFIERRARMVATRRSLTVDSVSDLGRLDPLAISQVRDEAAPTVRDADELH
DALLGRILLPVNEAADWSTHYLELQTDGRATTATLPDGRRAWVATERLPAVLATFDDIDV
APPVTVPENVRQEWESTEARVAIIRGLMEMCGPISVEEVAERTWTALNQAAAALEALEGE
GVVLQGHFTPACYDEKSDDPQPSGDVQREWCHRRLLSRIHRLTLQGLRKQIEPVSVDVFI
RHLTRHQQVLPETRRTGSDALFDAIAQLQGMDVPAVAWERDVLPARVENYQPAWLDELCM
TGEIGWGRLYPPRRDPQRSRPMVSLTKIARMSLFLRSDADWLSTSSVAVDVGELTTPAQQ
VLECLTERGAMFAGDLAAANHMLPGQLAETLGELVASGLVTADGFDGMRQFVANKPAASN
SALPARMRRGAGRRRLPVKSTGRWSVWERDSETSLTVEETTEQWAWQLLRRWGVIFRDLL
QREQGAPRWFELLQVYRQLEARGEIRGGRFITGVGGEQFALGDTVNQLRQLRDDGPRQEL
IVLSAADPLNLIGILTDHPRVPSTASNRIAYLDGMPVASLQAGVVEYLDDCPPAAYALVA
SRLQGDVTSDLSHDARQRSLERLENKNAESAAQRVRQRRETNGFQRPRVI
NT seq 4473 nt   +upstreamnt  +downstreamnt
atgcacgaaatcatgagcacgcttcacaacttccatccgctgattcaacaatggttccgc
tcccggttcgcagcgccgaccgaaccgcaacagcgcggttggccgtttattgctgatgga
cagcacaccttgattgctgctccgacggggagcggaaaaactttgaccgctttcttggcg
gcgattgatcggttgttgaagttggcgctggcgggggaacttgagcagcggacctatgtc
gtctacgtctcgccgctgcgggcgctgtcgaacgacatgcaccgcaatctggaagacccg
ctcaacgagattatggcgttggccgctgaaaacggcatcgatgtcccgccgattcgtgtg
ggcctgcgcaccggggatactaagtcgtcgcaacgcgccgcgctggtgcggaaaccaccg
cacattctcgtcacgacccccgagtcgttgtacttgatgctcaccgctgaaaagagccgc
gcaaaactgcaggctgtcgagacggtgattgtcgatgagatacacgccctggtcagcgat
aaacggggctcgcacttgtcgttgaccttggaacgcctgcaggcgtggtgcgaacggccg
tttcaacgcgtgggactttcagccacgcagcggccgatcgaagatacggcgcggtttctg
gtcgggttccatgaaagaaacgccgaacaacttccttgcgaaatcattgatgtcggtcat
cagcgcgaattggacttggcgattgaagtcccgcccagcgaactcggcgccgtttgcatg
cacgagcaatgggctgaggtgaatgagcggatcgccgagttgatcaacaatcaccgcagc
acgttgatcttcgtcaatacgcggcgaatggcggagcgaattacgcacctgctgaccgaa
ttgatgggcgaagacgccgtcagcagccatcacggttcgttggcggccaagtttcgattg
gagaccgaacaacgtcttaaggaaggcaaactcaaagcggtggtggcgaccgcttcgttg
gagttggggatcgacattgggtacatcgatctggtcatccaaatcggttcgccccgctcg
attgcgacctttctgcaacgggtcggacggtcggggcactcgttgggtttgatccccaaa
ggccggttgttcgcgctgacccgcgatgaattgtacgaatgcatggcactgctgcgagcg
gtgcgtggcggacgcttggaccgcattccgatcccgactgctccgttggatatccttgct
caacaaatcgtcgctgaagtctcggctgaggaatggggcactgacgaattgttcgccgca
ttccgccgtgccgcaccgtatcatgaattatcgcgggccgattttgacaaggttgtggaa
tttctcagcgaaggggtcgcgcacgccaacggccgtagccgtgtctttttacatcacgat
caagtcaaccgtcgtatccgcccgcgccccggcgcgcgtatggcggcaacgatgaatggc
ggggccattggcgaagtcgcgtcgtatcgcgtcattgctgagccggagcgaactgtcgtc
ggtacattggatgaagaattcgctgcggaaagccaagcgggcgatatttttctgctcggc
aatacgtcctggcggatccaacatgtccgcggtggcgaagtgaccgtgttcgatgcacat
ggtgcaccgccgtcgattccgttttggcgcggcgaagcgccagggcggaccctggaactt
tcggaagaggtctcacggctgcgggaggaattggaacctctcttagaagatgaagctgcg
gcgcagcaatggctcattggcgaaactgacattaccccggcggccgccgaacaagcggtg
acgtatgcggcggcgcaaaaagcggcgttggggttgttgccgacttgcaaacgcgtcgtc
tttgagcggttttttgacgagagtggcggcatgcagatgttgatccatgcccccttcggc
ggtcggatcaatacagcgtggggtatgtcgctgcgtaaacggttttgccggtcgtttgat
ttcgaactgcaggcgactgcggacgataacggcctgattctttcactcggcccgcaacac
agttttccgctggagagcatgttcggcatgctcaatccgaataacgctcgcaatttattg
gaacaggcgttgctggcggtgccgacgtttcaaattcgctggcggtggaacgtgacccgc
tcgttgcttgtcgcccggatgaacaacggcaaaaaagtgccgccgccgctgcaacgattt
cgcgcagatgatttgctgaccgccgtgttcccgaaattgaccggctgccaggagaatatc
accggcgaccacgagatccccgatcatcctctcattcggcaaacgatggaagattgtctg
ttcgaggcgatggacattgccggtttggaaaacgttcttactggcgtgcagcggggtgac
atcacctacgttgcgcgcgatacccgcgagccttcgccgttttgttacgaattgctcaac
gctagcccgtacgcgtttttggatggcggtgaatttatcgaacgtcgcgcgcggatggtg
gcgactcgccgctcattaaccgttgatagtgtgagtgatctcgggcggctcgatccactg
gccatctcgcaagtccgcgacgaagccgcgccaacggtgcgcgatgcggatgaattgcac
gacgccttgctggggcggattttgctgcccgtgaatgaagccgccgattggtcgactcat
tatttggaattgcaaactgacggacgggcgacgaccgccacgctgcccgatggccgccgt
gcgtgggtagcgaccgaacgactcccggcagtcttggcgacgtttgatgacatcgacgtc
gcgccgcctgtgactgttccggaaaacgtgcggcaagaatgggaatcgaccgaggcccgt
gttgctatcatccggggtttgatggaaatgtgcggcccgatttccgtcgaagaggttgcc
gagcgaacctggacggcgctcaaccaagcggcagctgccttggaagcactcgaaggcgag
ggcgtggtactacaaggccatttcacacccgcctgctacgatgaaaaatcggacgaccca
caacccagcggcgatgtgcagcgcgaatggtgtcatcgacgactgctgtcgcggattcat
cggcttacgttgcaaggcttgcggaaacaaattgagccggtcagcgttgacgtattcata
cggcacctcacgcgacatcaacaggtgcttcccgaaactcgacgtacgggatccgatgcg
ctgtttgatgcgatcgcacaattacagggcatggatgtcccggccgttgcttgggaacgg
gatgtgctgcctgcccgcgtcgagaattatcaacccgcctggttggatgaactgtgcatg
acgggggaaatcggttggggacgactgtatcctccgcgccgcgacccgcaacggagccgt
ccgatggtcagcctgaccaagatcgcgcggatgtcgttgttccttcgctccgatgccgat
tggttgagtacgtcctccgtagcggtcgatgtgggcgaattgaccacgcccgcgcagcag
gtgctggagtgtctgaccgagcggggcgcaatgttcgccggtgatttggccgccgccaat
cacatgctccccggccaacttgctgagacgctcggagaattggtggccagtggactggtg
accgccgatggctttgacggcatgcgacaatttgtggccaacaaacccgcagcatccaac
tccgccctgccggcgcggatgcgtcgcggcgccggtcgccgacggctaccggtcaaatcc
acagggcgttggtcggtctgggaacgggattccgagacgtcattgacggttgaagagacc
accgaacaatgggcgtggcagttgctacgccgttggggtgtgatcttccgagacctactg
cagcgagaacaaggtgcgccgcgctggtttgaattgctgcaagtctaccggcaattggaa
gcccggggcgagattcgcggtgggcgcttcatcaccggcgtggggggcgagcaatttgcg
ttgggggacacagtcaatcaactgcggcaactgcgcgacgacggtccgcggcaggaattg
attgtcctctccgccgccgatccgctgaatctgatcggcatcctcaccgatcacccgcgc
gtccccagcaccgcctcgaatcgcatcgcctatctggatggcatgcccgtcgcaagtctg
caagcgggagtggttgaatacctggacgattgccccccggctgcttacgcgctggttgca
tcgcgactccaaggggacgtcaccagcgacctcagtcacgacgcccggcaacgttcgctg
gagcgactggaaaacaagaatgccgaatccgctgcccaacgagtccgtcaacgccgtgaa
acgaacgggtttcaacgtccgcgggtgatttga

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