KEGG   Symmachiella dynata: Mal52_16410
Entry
Mal52_16410       CDS       T06944                                 
Symbol
spoVD_1
Name
(GenBank) Stage V sporulation protein D
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
sdyn  Symmachiella dynata
Pathway
sdyn00550  Peptidoglycan biosynthesis
sdyn01100  Metabolic pathways
sdyn01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:sdyn00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Mal52_16410 (spoVD_1)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Mal52_16410 (spoVD_1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sdyn01011]
    Mal52_16410 (spoVD_1)
Enzymes [BR:sdyn01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Mal52_16410 (spoVD_1)
Peptidoglycan biosynthesis and degradation proteins [BR:sdyn01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   Mal52_16410 (spoVD_1)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer PBP_dimer_2 DUF1572
Other DBs
NCBI-ProteinID: QDU43169
UniProt: A0A517ZL01
LinkDB
Position
complement(2030342..2032645)
AA seq 767 aa
MESTGDPLVTMWKPNTPIMRNRVTSFDTTRSSASSAWTADENPRGRLWGLFAGVFVLLSI
VIARVAYLQVHLADGYQQDFATIRETVESMPSRDARIVSADGQVLAQDVGYFQVAAYYRW
LESPPDPKWLRMKARERLTRGQRRDTQLVEAAEREVLAQQKRMWKELAALSGMDETVLTQ
RRGDIQRRVERIVELVEKRRAERFEEEQASETASTSEPSGQSAWQRGWNAFVKALTTAPD
RGRLDPIIVREQQDYHTILFEIDLKRGMHIEAHPERFPGLKLVESTRRRYPHGELAAHVI
GYRQPISGEALAERKARFGSADPLDYRTGDRIGKTGIERVYERQLHGLRGQRRRYLSHRG
EIIRTEIERKPMVRPDINLTLDTRLQRHAEQLLDAALNRRPTQTDEEEKDELPIPAGGAI
VALDVHSGAILAAASAPRFDLDLLAQGDQEVFEAARKDQRSPFLPRVTRMTLPPGSVFKT
LTAAAVLESGAIGVHQDFFCQGYLDDPEHHRCYIFRHYGVGHGHIDLQAALEQSCNVYFY
SAARRSGPQPIVDWAARLGFGQPTGIDLPGERGGHLPTLKSGSGRNGRWQVADTLGLAIG
QSSLTVTPLQIARLMAVVANGGYLVTPHLVSHVGSIHAAGNDSESEYDWTVRNPQRVAGL
KGETLEQIHAGLVRVVEERHGTGYKTVRLPGVAIAGKTGTAEVGANRADHAWFAGYAPAE
QPQVAFVVVLQHAGSGGHAAGPLAREFVRKLVELDFVEGKLELAAGE
NT seq 2304 nt   +upstreamnt  +downstreamnt
gtggagtcgaccggcgatcccctggtaaccatgtggaaacccaatacaccaatcatgcgg
aatcgtgtcactagttttgatacgacgagatcctcggcgagttccgcctggacagctgac
gaaaatccgcgcgggagattgtggggtctgttcgccggggtgttcgtgttgttgtcgatc
gtgatcgcccgcgtggcctatttacaggttcacttggccgatgggtatcaacaagacttc
gccacgatccgtgaaaccgttgaatcgatgcccagtcgggatgcacggattgtcagcgcg
gatggacaagttctggcccaggatgtcggctattttcaagtggcggcgtattatcgctgg
ctggaatctcctcccgatcccaaatggttgcggatgaaggcccgcgaacggctcacgcgt
ggacagcgtcgcgacacgcaacttgtggaagccgctgagcgggaagtcctagcgcagcaa
aaacgcatgtggaaggaattggcggcgctgagcgggatggatgaaacggttctcacccag
cgcagaggcgacatccaacgacgtgtggaacggattgttgagttggttgaaaaacgtcgt
gctgagcgatttgaggaggaacaggcgtcggagactgcttcgacgtcggagccatccggc
caatctgcttggcaacgtggctggaacgcctttgtgaaggcgttgacgacagctccggat
cgcggacgtctcgatccgattattgtgcgggaacaacaggactatcatacgatcctgttt
gaaatcgacctgaaacgtgggatgcacatcgaagcgcacccggaacggtttcccgggctg
aagctggtcgagtcgacgcggcgacgttatccacacggagaattggcggcacacgtcatc
ggttatcgccaaccgatcagcggcgaggcattggcagagcggaaagcacgtttcggctcg
gccgatccgttggactaccggacgggggaccgaattgggaaaacaggaatcgagcgagtc
tatgaacggcagttgcatggattgcgggggcagcgacggaggtatctgagccaccgtggg
gaaattattcgcaccgaaattgaacgcaaaccgatggtgcgtccggacatcaacttgacg
ttggacacgcggctgcaacgtcatgcggaacaactgctggacgcggcattgaatcgtcgc
cccacgcaaacggacgaagaagaaaaggatgagttgccgattcccgccggcggcgcgatt
gtggcgttggatgtgcactccggagccatcttggcagcggcctcagcgccgcggtttgat
ctggacctgttggctcaaggggaccaggaagtctttgaagccgcccggaaggatcagcgc
agcccctttttaccacgggtaacacgcatgacgctgccccccggatcggtctttaaaaca
ttgacagccgcggcggtgctagaaagtggtgcgatcggtgtgcaccaagatttcttttgc
caggggtatctcgatgatccggagcatcatcgttgctatatcttccggcattatggcgta
gggcatggtcacatcgatttacaggcggcgctggagcagtcttgcaacgtttatttctac
tccgccgcacgacgcagcggaccgcagccgattgtggactgggccgctcggctgggattc
gggcaaccaacggggattgacttgccgggcgaacggggcggccatcttcccacattgaag
tcgggcagtggacggaatggacgttggcaagtggccgacaccttaggactggccatcggt
caatcctcgttaacggtgacgccgctgcagattgcccgcttgatggctgtcgtggccaat
ggcggatatctggtcacgccacatctggtcagccatgtcgggtcgattcatgcagcgggc
aacgattctgaatccgagtacgattggacagtcagaaatccgcaacgcgtggcgggtctg
aagggtgaaaccttggaacaaattcacgccggtctggtgcgtgtcgtcgaggaacggcac
ggaacgggatataaaacggtccgcttgccgggcgtagcgattgccggaaaaacggggacc
gccgaagtcggtgccaatcgtgcggaccatgcatggtttgccggatacgcaccagctgaa
caaccacaagttgcgtttgtggtggtgttgcaacacgcgggatcgggtggccacgccgcc
gggccgttggctcgcgaatttgtgcgcaaactggtggagctggatttcgttgagggcaaa
ctcgaattggccgcaggcgaataa

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