Symmachiella dynata: Mal52_16410
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Entry
Mal52_16410 CDS
T06944
Symbol
spoVD_1
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn00550
Peptidoglycan biosynthesis
sdyn01100
Metabolic pathways
sdyn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Mal52_16410 (spoVD_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Mal52_16410 (spoVD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdyn01011
]
Mal52_16410 (spoVD_1)
Enzymes [BR:
sdyn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Mal52_16410 (spoVD_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdyn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Mal52_16410 (spoVD_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
DUF1572
Motif
Other DBs
NCBI-ProteinID:
QDU43169
UniProt:
A0A517ZL01
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All DBs
Position
complement(2030342..2032645)
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AA seq
767 aa
AA seq
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MESTGDPLVTMWKPNTPIMRNRVTSFDTTRSSASSAWTADENPRGRLWGLFAGVFVLLSI
VIARVAYLQVHLADGYQQDFATIRETVESMPSRDARIVSADGQVLAQDVGYFQVAAYYRW
LESPPDPKWLRMKARERLTRGQRRDTQLVEAAEREVLAQQKRMWKELAALSGMDETVLTQ
RRGDIQRRVERIVELVEKRRAERFEEEQASETASTSEPSGQSAWQRGWNAFVKALTTAPD
RGRLDPIIVREQQDYHTILFEIDLKRGMHIEAHPERFPGLKLVESTRRRYPHGELAAHVI
GYRQPISGEALAERKARFGSADPLDYRTGDRIGKTGIERVYERQLHGLRGQRRRYLSHRG
EIIRTEIERKPMVRPDINLTLDTRLQRHAEQLLDAALNRRPTQTDEEEKDELPIPAGGAI
VALDVHSGAILAAASAPRFDLDLLAQGDQEVFEAARKDQRSPFLPRVTRMTLPPGSVFKT
LTAAAVLESGAIGVHQDFFCQGYLDDPEHHRCYIFRHYGVGHGHIDLQAALEQSCNVYFY
SAARRSGPQPIVDWAARLGFGQPTGIDLPGERGGHLPTLKSGSGRNGRWQVADTLGLAIG
QSSLTVTPLQIARLMAVVANGGYLVTPHLVSHVGSIHAAGNDSESEYDWTVRNPQRVAGL
KGETLEQIHAGLVRVVEERHGTGYKTVRLPGVAIAGKTGTAEVGANRADHAWFAGYAPAE
QPQVAFVVVLQHAGSGGHAAGPLAREFVRKLVELDFVEGKLELAAGE
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
gtggagtcgaccggcgatcccctggtaaccatgtggaaacccaatacaccaatcatgcgg
aatcgtgtcactagttttgatacgacgagatcctcggcgagttccgcctggacagctgac
gaaaatccgcgcgggagattgtggggtctgttcgccggggtgttcgtgttgttgtcgatc
gtgatcgcccgcgtggcctatttacaggttcacttggccgatgggtatcaacaagacttc
gccacgatccgtgaaaccgttgaatcgatgcccagtcgggatgcacggattgtcagcgcg
gatggacaagttctggcccaggatgtcggctattttcaagtggcggcgtattatcgctgg
ctggaatctcctcccgatcccaaatggttgcggatgaaggcccgcgaacggctcacgcgt
ggacagcgtcgcgacacgcaacttgtggaagccgctgagcgggaagtcctagcgcagcaa
aaacgcatgtggaaggaattggcggcgctgagcgggatggatgaaacggttctcacccag
cgcagaggcgacatccaacgacgtgtggaacggattgttgagttggttgaaaaacgtcgt
gctgagcgatttgaggaggaacaggcgtcggagactgcttcgacgtcggagccatccggc
caatctgcttggcaacgtggctggaacgcctttgtgaaggcgttgacgacagctccggat
cgcggacgtctcgatccgattattgtgcgggaacaacaggactatcatacgatcctgttt
gaaatcgacctgaaacgtgggatgcacatcgaagcgcacccggaacggtttcccgggctg
aagctggtcgagtcgacgcggcgacgttatccacacggagaattggcggcacacgtcatc
ggttatcgccaaccgatcagcggcgaggcattggcagagcggaaagcacgtttcggctcg
gccgatccgttggactaccggacgggggaccgaattgggaaaacaggaatcgagcgagtc
tatgaacggcagttgcatggattgcgggggcagcgacggaggtatctgagccaccgtggg
gaaattattcgcaccgaaattgaacgcaaaccgatggtgcgtccggacatcaacttgacg
ttggacacgcggctgcaacgtcatgcggaacaactgctggacgcggcattgaatcgtcgc
cccacgcaaacggacgaagaagaaaaggatgagttgccgattcccgccggcggcgcgatt
gtggcgttggatgtgcactccggagccatcttggcagcggcctcagcgccgcggtttgat
ctggacctgttggctcaaggggaccaggaagtctttgaagccgcccggaaggatcagcgc
agcccctttttaccacgggtaacacgcatgacgctgccccccggatcggtctttaaaaca
ttgacagccgcggcggtgctagaaagtggtgcgatcggtgtgcaccaagatttcttttgc
caggggtatctcgatgatccggagcatcatcgttgctatatcttccggcattatggcgta
gggcatggtcacatcgatttacaggcggcgctggagcagtcttgcaacgtttatttctac
tccgccgcacgacgcagcggaccgcagccgattgtggactgggccgctcggctgggattc
gggcaaccaacggggattgacttgccgggcgaacggggcggccatcttcccacattgaag
tcgggcagtggacggaatggacgttggcaagtggccgacaccttaggactggccatcggt
caatcctcgttaacggtgacgccgctgcagattgcccgcttgatggctgtcgtggccaat
ggcggatatctggtcacgccacatctggtcagccatgtcgggtcgattcatgcagcgggc
aacgattctgaatccgagtacgattggacagtcagaaatccgcaacgcgtggcgggtctg
aagggtgaaaccttggaacaaattcacgccggtctggtgcgtgtcgtcgaggaacggcac
ggaacgggatataaaacggtccgcttgccgggcgtagcgattgccggaaaaacggggacc
gccgaagtcggtgccaatcgtgcggaccatgcatggtttgccggatacgcaccagctgaa
caaccacaagttgcgtttgtggtggtgttgcaacacgcgggatcgggtggccacgccgcc
gggccgttggctcgcgaatttgtgcgcaaactggtggagctggatttcgttgagggcaaa
ctcgaattggccgcaggcgaataa
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