Symmachiella dynata: Mal52_23130
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Entry
Mal52_23130 CDS
T06944
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sdyn
Symmachiella dynata
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdyn03032
]
Mal52_23130 (ihfB)
03036 Chromosome and associated proteins [BR:
sdyn03036
]
Mal52_23130 (ihfB)
03400 DNA repair and recombination proteins [BR:
sdyn03400
]
Mal52_23130 (ihfB)
DNA replication proteins [BR:
sdyn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Mal52_23130 (ihfB)
Chromosome and associated proteins [BR:
sdyn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Mal52_23130 (ihfB)
DNA repair and recombination proteins [BR:
sdyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Mal52_23130 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
RNA_pol_Rpc34
HU-CCDC81_bac_2
PHD_3
Motif
Other DBs
NCBI-ProteinID:
QDU43836
UniProt:
A0A517ZMZ9
LinkDB
All DBs
Position
complement(2833298..2833759)
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AA seq
153 aa
AA seq
DB search
MTKKEIVKAISEEIGLTQLKTKEIVQKTFDAIVDTLVRDGRIELRNFGVFEVKKRAARKA
RNPRTGDKVFVPEKFVVTFKPGKEMEEKVLQLEVEAAQSALAQQHTAQAAGGETPPGTNA
SNTESGNTNSLPGQTTYPNSVASVSSHDSHNPG
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaaaaagaaatcgtcaaagccatttccgaggaaatcggactgacacaactgaag
acgaaagagatcgtccagaagaccttcgatgccatcgtagataccctggtccgcgacggg
cggattgagttacgaaactttggcgttttcgaagtcaagaagcgggcagcgcgtaaagca
cgcaatccgcggaccggcgataaagtctttgtgcctgagaagttcgttgtcacattcaaa
ccgggcaaggaaatggaagagaaggtgttgcagttggaagttgaagccgcgcaatcggct
ttggcgcaacaacatacggcacaagcagcgggcggagaaacacctcccggtacgaatgcg
tcgaacaccgagtccggcaatacaaattccctgccgggccaaacgacctatcccaattcg
gtggcctcggtcagttcgcacgattcgcacaacccgggctag
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integrated database retrieval system
