Symmachiella dynata: Mal52_24460
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Entry
Mal52_24460 CDS
T06944
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn03420
Nucleotide excision repair
sdyn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mal52_24460 (pcrA_1)
03430 Mismatch repair
Mal52_24460 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdyn03400
]
Mal52_24460 (pcrA_1)
Enzymes [BR:
sdyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mal52_24460 (pcrA_1)
DNA repair and recombination proteins [BR:
sdyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mal52_24460 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Mal52_24460 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_16
ResIII
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QDU43968
UniProt:
A0A517ZNE0
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All DBs
Position
2998093..3000660
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AA seq
855 aa
AA seq
DB search
MIIVGHSAQLWCYSYGHIITEAQMSGVCYRIISIKAVEIRKFWGRADCPTESFWTAVNGA
GECSSVVGMTIGWSKRERILYDCWNGPWTERGPCLEFRFYKQRLLNNLTASQQQAVDHKE
GPLLVLAGPGSGKTRVITHRIAQLVQSGVHPYNILAITFTNKAAREMGERVEALLPDAKI
WVSTFHRFCAQLLRKHARGVGLQPNYTILDTSDQRRLLKSVLTELGHDVKHFPPAKVAAR
ISSSKNRLVGPEEFALNPGGGIGDTMLRVVTEAYPAYQRALQDSNAVDFDDLLLHVARLL
EENPALRSQLDERFQYVLVDEYQDTNLPQYRIVRALSQDYPNLCATGDPDQSIYAWRGAE
IGNILRFEQDYPDAKVVRLEHNFRSTKAILRQADLLIGHNFNRKAKELLTENDEGPPVEL
LTFTDGAAEAEGIALRIQDLVDQAGRAWSDFAIFYRVNALSRSIERALARFHIPYQVAAG
VGFYDRAEVKDIVAYLRLIANPADRTAFERVVNVPARGIGKTSLTRLTAWTTGQGGGLLE
AAARAEEVPKLTKRAVKALHGFYELISQLSQRTAQGVAELITQVVTQTGYDHSWLDDPTE
QNMERAANVDELISAARQYDAAHGDDATLEGFLEESSLINDVDSLDEHAGSVTLMTLHAA
KGLEYPVVFIVGVEQNLLPHERAINSDDPHELEEERRLLFVGMTRAEEQLMLTQTAVRDI
RGQRLSTIPSPFLFEMDLAATVVETDSEYIAWDDDYAHDDSLDDFEPIIKQRPEEDAPRP
QMMTAADLLNGTNTPTDIPRGFSIGMDVRHPQYGVGTVRNVDGFGRRKTVTVEFAAGECR
NFDIAKSPLQPVGQR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaggccacagcgcgcagctatggtgttatagttacggtcacataataact
gaagcgcaaatgagtggcgtttgttacaggataatttctatcaaagccgtggaaattaga
aaattctgggggcgggcagattgtccgacagaatcattctggacagcggtgaacggggca
ggggagtgttcctcagtcgtcggaatgacaattggctggtcaaaacgcgagcgcattctt
tatgattgctggaacgggccgtggacggagcgcggcccttgcctcgagttccgattttac
aagcagcgacttttgaacaatctcacagccagccaacaacaggcggtcgaccacaaggag
ggaccgctgctcgtgcttgccggtcccggttcgggcaagacgcgggtgatcacgcaccgt
atcgcccagttggtgcaaagcggcgtgcatccctacaacattctggcgatcaccttcacc
aacaaagcggctcgtgaaatgggtgagcgtgttgaagcgctgttgccggatgccaaaatc
tgggtcagcacgtttcaccggttctgcgcacaattgctgcgcaagcacgcacgcggcgtc
ggactgcagccgaactacacgattctcgacacctcggaccaacgacggttgctcaaatcg
gtgcttaccgagttggggcacgatgtcaaacattttccacccgccaaagtggcggcgcgg
attagctccagcaaaaatcgtctcgtcggccccgaggagtttgccctcaaccctggggga
ggaataggcgatacaatgttgcgggttgtgacggaggcctaccccgcctatcaacgcgcg
ttgcaagacagcaatgcggtcgacttcgacgacctgttgctgcacgtggcgcgcttgctg
gaagaaaaccccgccttgcggagccaactggacgagcggtttcaatacgttctcgtcgat
gaatatcaggacaccaacctaccgcaataccgcatcgtccgcgcgttgtcacaggattat
cccaatctatgcgccaccggtgatcccgatcaatcgatctatgcctggcggggggccgag
atcggcaacatcttgcgtttcgaacaagattatcccgatgcaaaagtcgtccgcctggaa
cataatttccgcagcactaaggccatcttgcggcaagcggatctgttgatcggtcacaat
tttaaccgcaaagccaaggaattgctgacggagaatgatgaagggccgccggtcgagtta
ttgacgttcaccgacggcgctgccgaggcagaagggatcgcgctgcggattcaagacctc
gtggatcaagcaggcagagcgtggtcggacttcgcaatcttttatcgggtcaacgcactt
tcgcgaagcatcgaacgagcattggcccgctttcacattccgtatcaagtcgccgccggt
gttgggttttacgaccgggccgaagtcaaagacatcgtcgcctacctacggctgatcgcc
aacccggctgaccggaccgcgtttgaacgagtcgtcaacgtccccgcgcggggcatcggc
aaaacatcactgacgcgtttaaccgcttggacaacggggcaggggggcggtttgttggaa
gcagcggcgcgtgcggaggaggtccccaagctaacaaagcgcgccgtcaaagcactgcat
gggttttacgaattgatctcccaactgtcgcaacgcacggcgcagggagtcgccgagttg
atcacgcaggtcgttacacaaaccggctatgatcattcttggctggatgaccccacggaa
caaaacatggagcgggctgccaacgtcgatgaattgatctccgcagcccggcaatacgat
gcagcgcacggcgacgatgccacgttggaaggattcctggaagaaagttcgctgatcaac
gatgtggatagcctggatgaacatgcgggcagcgtaacattgatgacgttgcacgccgct
aaggggttggaatatccggtggtcttcatcgtcggtgttgaacaaaacctgttaccgcac
gaacgggcaatcaacagtgacgacccgcatgaactggaagaggagcgacgtttgttgttc
gtgggcatgacccgtgcggaagagcagttgatgctcacgcaaacagcagtgcgggatatc
cgcggccagcgactctcgacgatccccagcccgtttttgttcgagatggatctcgccgcc
accgtcgtcgaaaccgacagcgaatatatcgcgtgggacgatgactatgcccacgacgat
tcgctggacgacttcgaaccgatcatcaaacagcgccccgaagaagacgcgccgcgacca
caaatgatgaccgccgccgacttgctcaatggcaccaacaccccgacggatattccgcgc
ggtttcagcattggcatggacgtccgccatccgcaatacggtgtcggcaccgtccgcaac
gtcgacggcttcggtcgccgcaaaacagtcacggtcgaattcgcagcaggggagtgccgc
aacttcgacatcgccaaaagcccgctgcaaccggtcgggcagcgttag
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