Symmachiella dynata: Mal52_33410
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Entry
Mal52_33410 CDS
T06944
Name
(GenBank) PKD domain protein
KO
K20276
large repetitive protein
Organism
sdyn
Symmachiella dynata
Pathway
sdyn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mal52_33410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
He_PIG
K319L-like_PKD
Motif
Other DBs
NCBI-ProteinID:
QDU44855
UniProt:
A0A517ZQX8
LinkDB
All DBs
Position
4164356..4169551
Genome browser
AA seq
1731 aa
AA seq
DB search
MLFRTYWLTRLSVANCLTALRHPRLLDDSTILQPLRLEERRLLDSNPVITALDVTPTVVD
EGETVTLSGKFQDAPPGEADHHILINWGDGQTSELTGDFSGSTSGANREFTATHIYQNAP
TGGSSQSQYTITVIITDASNGSDTAQTHVSVNNTIPTLADLTITSPVLENDFATVSGRVV
AAGIRDTHTVSVNWGDGSAASIIQLAARETTFTATHRYLDDNPTGTPQDIYPVTVSVVDN
ENSGSQQQLDVTVQNVAPQITTLATKPDAVEEGSPLVLDGTFSDIGSRDTHSATINWGDG
TSSSVAAGGGIFSGEHTYVDSGVYTISVTLTDDDGGSSTSQINVIIGNSIPTLTDLTITS
PVLENGLATVTGRVVDAGIRDTHIVSVNWGDGSEATIIQLAARETTFTATHRYLDDNPTG
TPQDIYPVTVSVVDNENSGSQQQLAVTVQNVAPQITTLATKPDAVEEGSLLVLDGTFSDV
GSRDTHSVTINWGDGRTSNVLAGGGIFNGEHTYVDSGTYTIAVTLTDDDGGSSTSQINVT
IGNSIPTLNDLTITSPIFENGLATVTGRVVDAGIRDTHTVSVNWGDGSAASIIQLAAGET
TFTATHRYLDDNPTGTPQDIYPVTVSVVDNENSGSQQQLDVTVQNVAPQITTLATKPDAV
EEGSPLVLDGTFSDIGSRDTHSATINWGDGTSSSVAAGGGIFSGEHTYVDSGTYTIAVTL
TDDDGGSSTSQINVTIGNAIPTLTDLTITSPIFENDIATVTGRVVDVGIRDTHTVSVNWG
DGSAASIIQLAARKTTFTATHRYLDDNPTGTPQDIYPVTVSVVDNENSGSQQQLNVTVQN
VAPQITSLTTKPDAVEEGSPLALDGTFSDVGSRDTHTATIDWGDGTSSNVSAGGGIFSGE
HTYVDSGTYTIAVTLTDDDGGSSTSQINVTIGNAIPTLNDLTITSPIFENGFATVTGRVV
DAGSRDTHTVSVNWGDGSAASIIQLAARETTFTATHRYLDDNPTGTPQDIYPVTVSVVDN
ENSGSQQQLDVTVQNVAPQITTLATKPDAVEEGSPLVLDGTFSDIGSRDTHSATIDWGDG
TTSNVAAGGGIFSGEHTYVDSGTYTIAVTLTDDDGGSSTSQIDVTIGNAIPTLTDLTITS
PIFENDIATVTGRVVDAGSRDTHTVSVNWGDGSTASLIQLAAGETTFTATHRYLDDNPTG
TPQDIYPVTVSVVDNENSGSQQQLDVTVQNVAPQITTLTTKPDAVEEGSPLVLNGTFNDV
GSRDTHTATINWGDGTSSNVAASGGIFSGEHTYVDSGVYTISVTLTDDDGGSSTSQIDVT
IGNAIPTLADLTINSPILENGLATVSGRVVDAGSLDTHIVRVNWGDGSAASLIQLAAGET
TFTATHRYLDDNPTGTPQDIYPVTVSVVDNENSGSQQQLPVTVQNVAPIIDSAALTAIPE
VDAEFVVSGKFSDAGSLDDHTLTVDWGDGSAPSVIQYTGGAQNFIASHVFESEGAFAITA
TLRDDDGATAVSRFSADVSLETQLIVTEFPQATVANAPSGGYVAGVVIKSSRENITTTVS
PNPTTSIPFEGNTSDRPVKAMENRGSQEEVVVIELLSPEGKRIRHQNLPKTILVDLPEYI
RKLPDGHYRFYFKTPEAQRLIMDVHVRGGQIIDPGDLLKTQQQNVSQTPTNDGELPAQAS
ALRIDAADQGESTSAHIDHPNWEATVDSAMSKFPESSSQVPWSARRSTSTF
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcgcacctattggctgacgcggctttcggtagctaactgcctaacggcccta
cgtcacccgcgacttctcgacgattcgacgatcctgcagccgctacggcttgaggaacgc
cgtctcttagacagcaatccggtgatcactgcccttgatgtcactcccacggttgtcgac
gaaggtgagacggtcactctcagcggaaaattccaagatgccccacccggcgaggccgat
caccacatcctgatcaattggggagacggacaaaccagtgaactgacaggtgactttagc
ggatcaacgtccggagccaaccgcgaattcaccgcaacccacatctaccagaacgcaccg
accggcggctcttcgcaaagtcaatacacaatcaccgtcatcataaccgacgcaagtaac
ggcagtgacactgcacaaacccacgtcagcgtcaacaacacgatccccaccctagcggat
ttgaccatcacctcgcccgtgctggagaacgacttcgccaccgtcagcggacgcgtcgtc
gctgccggcatccgcgacacgcacaccgtcagcgtcaattggggagacggcagcgcagcg
tcgatcatccaactcgccgcccgggaaaccaccttcaccgccacgcaccgctacctcgac
gacaaccccaccggcacaccgcaagacatctatcccgtcaccgtctccgtcgtagacaac
gaaaacagcggcagccaacaacaactcgacgtcaccgtgcaaaacgtcgctccacagatc
accacgctggccaccaaaccggatgccgtcgaagaaggctcacccctcgtgctcgacggc
acgttcagtgacattggttcccgcgacacgcacagcgccaccattaactggggcgacggc
accagcagcagtgtcgccgccggcggcgggatcttcagcggcgagcacacctacgttgat
tcgggtgtctacaccatctccgtgaccctcaccgatgatgatggcggcagtagtacctca
cagatcaacgttatcatcggcaattcaattcccacactgacggacctcaccatcacttca
cccgtgctggaaaacggcctcgccaccgtcacaggaagggtcgtcgatgcgggcatccgc
gacacgcacatcgtcagcgtcaattggggagacggtagcgaagcgacgatcatccaactc
gccgcccgggaaaccaccttcaccgccacgcaccgttacctcgacgacaacccgaccggt
acgccacaggacatctaccccgtcaccgtctctgtcgtcgacaacgaaaacagcggcagc
caacagcaactcgccgtcaccgtccaaaacgtcgcaccgcagatcaccacgctggccacc
aaaccggatgccgtcgaagaaggctcgctcctggtcctcgacggaacgttcagtgacgtc
ggcagtcgcgacacacacagcgtcaccatcaactggggcgatggcaggaccagcaacgtg
ttggccggcggcggaatcttcaacggtgagcatacctacgtcgactcgggaacctacact
atcgccgtcaccctcaccgacgacgacggcggtagcagtacgtcgcaaatcaacgtcacc
atcggcaactcgatccccacactcaacgatctgacaatcacttcgcccatctttgaaaac
ggcctcgccaccgttacgggaagggtcgtcgatgcgggcatccgcgacacgcataccgtc
agcgtcaattggggcgacggtagtgcagcgtcgatcatccaactcgccgccggcgagacc
actttcaccgcgacgcaccgctatctcgatgataaccccaccggcacgccacaggacatc
tatcccgttaccgtctccgtcgtcgacaacgaaaacagcggcagccaacaacaactcgac
gttaccgtgcaaaacgtcgcaccgcagatcaccacgctggccaccaaaccggatgccgtc
gaagaaggctcacccctcgtgctcgacggcacgttcagtgacattggttcccgcgacacg
cacagcgccaccattaactggggcgacggcaccagcagcagtgtcgccgccggcggcggg
atcttcagtggcgagcacacctacgtcgactcgggaacctacactatcgccgtcaccctc
accgatgacgatggcggtagcagtacctcacaaatcaacgtcaccatcggcaacgcgatc
cccacgctgaccgatctgacgatcacctcgcccatcttcgagaacgacatcgccacggtc
accggacgcgtcgtcgatgttggcatccgcgacacgcacaccgtcagcgtcaattggggc
gacggcagcgcagcgtcgatcatccaactcgccgcccggaaaaccaccttcaccgccacg
caccgttacctcgacgacaacccgaccggcacgccacaggacatctatcccgtcacggtc
tctgtcgtcgataacgaaaacagcggcagccaacagcaactcaacgtcaccgtgcaaaac
gtcgcaccgcagatcacgtcactcaccaccaaaccggacgccgttgaagaaggctcaccc
ctcgcgctcgacggcaccttcagtgatgtcggcagccgcgatacgcacaccgccacgatt
gactggggcgacggcaccagcagcaacgtatcggccggcggcgggatcttcagtggcgag
cacacctacgtcgattcgggaacctataccattgcggttacgctcaccgatgacgatggc
ggtagcagtacctcacaaatcaacgtcaccatcggcaacgcgatccccacactcaacgat
ctgacaatcacttcgcccatcttcgagaacggcttcgccaccgttacgggacgcgtcgtc
gatgcgggcagccgcgacacgcataccgtcagcgtcaactggggcgacggcagcgctgcg
tcgatcattcaactcgccgcccgggaaaccaccttcaccgccacgcaccgttacctcgac
gacaacccgaccggcacgccacaggacatctatcccgtcacagtctccgtcgtcgacaac
gaaaacagcggcagccaacagcaactcgacgtcaccgtgcaaaacgtcgctccacagatc
accacgctggccaccaaaccggacgccgtcgaagaaggttcccccctcgtgctcgacggc
acgttcagtgacattggttcccgcgacacgcacagcgccaccatcgattggggcgacggc
acgaccagcaacgtcgctgccggcggcggaatcttcagtggtgagcacacctacgtcgac
tcgggaacctacactatcgccgtcacgctcaccgacgatgacggcggtagcagtacctcg
caaatcgacgttaccatcggcaacgcgatccccacgctgaccgatctgacgatcacctcg
cccatcttcgagaacgacatcgccaccgttacgggacgcgtcgtagatgccggcagccgc
gacacgcataccgtcagcgtcaactggggcgacggtagcacagcgtcactcatccaactc
gccgccggggagacgaccttcaccgccacgcaccgttacctcgacgacaacccgaccggt
acgccacaggacatctaccccgtcaccgtctctgtcgtcgacaacgaaaatagcggcagc
caacagcaactcgacgtcaccgtgcaaaacgtcgcgccgcagatcacaacactcaccacc
aaaccggacgccgtcgaagaaggctcacctctggtgctgaacggaacgttcaacgatgtc
ggcagccgcgacacacacaccgccacgatcaactggggcgacggcaccagcagtaacgtg
gccgctagcggcgggatcttcagtggcgaacatacctacgttgattcgggtgtctacacc
atctccgtcacgctcaccgacgatgacggcggtagcagtacctcgcaaatcgacgttacg
attgggaacgcgattcctacgctggccgacctgacgatcaattcgccaatattagagaac
ggcctcgccaccgtcagcgggcgcgtcgtcgatgcgggaagtttggacacgcacatcgtc
cgcgtcaattggggcgacggtagcgcagcgtcactcatccaactcgccgccggcgagacc
accttcaccgccacgcaccgttacctcgacgacaatcccaccggcacaccgcaggacatc
taccccgtcactgtctccgtcgtcgacaacgaaaatagcggcagccaacaacaacttccc
gtcaccgtgcagaacgtcgctccgattatcgacagtgctgcattaacagcgattccggag
gtcgatgcggaattcgtggtatccggtaagttttcagatgccggttcactggacgaccat
acgctgacagtcgactggggtgatggatcggcgccctcagtgattcagtacacgggtgga
gcacaaaactttattgcctcgcatgtgtttgagtccgaaggagcctttgcgattacggct
acgctgcgggacgatgatggtgcgacagccgtttcaagattttcagccgatgtcagcctg
gaaacacaactgattgtcaccgagttccctcaagcgacggtggcgaatgcccccagcggt
gggtatgtcgctggcgtcgtgattaagtcgtctcgcgaaaacattacgaccacggtctcc
cccaatccgacaacatcaattcccttcgaaggcaataccagcgaccgaccggtgaaggcc
atggaaaatcgcggttctcaggaagaagtggttgtgattgaactgctgtctcctgaggga
aagaggattcgacaccagaatcttcccaagaccattctggtggatcttcccgaatatatt
cgaaaattgcccgacggtcattatcgcttttacttcaagacgcctgaagctcagcgtctg
attatggatgttcatgtcagaggcggacaaattattgatccgggagatttgttgaaaacg
caacaacaaaacgtttcacaaacccccacaaatgacggcgaattaccggcgcaggcgagt
gccctgcgaattgatgccgcggatcaaggcgaatcgaccagcgctcacatcgatcatcct
aactgggaagcaacggtcgactcggcgatgtccaagtttcccgaaagttcgtcccaagtc
ccgtggtcggcacggcgctccacttcaactttctaa
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integrated database retrieval system
