Symmachiella dynata: Mal52_34270
Help
Entry
Mal52_34270 CDS
T06944
Name
(GenBank) ATP-dependent helicase HepA
Organism
sdyn
Symmachiella dynata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
AAA_11
Retrotran_gag_4
Motif
Other DBs
NCBI-ProteinID:
QDU44941
UniProt:
A0A517ZR34
LinkDB
All DBs
Position
complement(4290069..4293380)
Genome browser
AA seq
1103 aa
AA seq
DB search
MGITTLMEPKFRGDIRYRGAAYIKAERVTITHVTVDRISAVVSDGVGFETHIDRSNGEEL
QMYCTCFSGEKPLMHCKHLWATILAVESEGLIGGTVKPGHIPPFAADPSPSLSFDADWDE
DWDDSEVYGTGSSRSTKTVVKVEKELPAWAQKLQAVSDAMQVGGSVQGTSAKDREIFFEI
DIAASDEANQLVIQTSQRERRANGQWGKLKPLKLRPGQLDDVEDEEDRKILAYLAGSTAD
RGNWHARQAETQSTSFRYLVPYELCGLVLPMICASGHGRYLHGSEKHPVPLAWDEEPAWE
LCLNVKFYDEFDQWRVDGSFQREGDEMQVREPQLIVPGGYIFTETHISQFRDYGVFEWAR
QLRGGDPISVPNGEENELVDRLFDMPLLPKMILPEALQLEEVRCTPKPRLILRSPRGLKW
QSRKLQGEVFFNYDGTNIRATSPQGAVVQRSERRCIPRDRAVEERDWKLLSENGFQRLLD
HRRRNADVEINARNLGPGVRSLVGEGWIVEADGSRIHQPLHMGFQIKSGIDWFELHADVD
FDGRSIDFPDLLSALSRGDSTVRLDDGSLGILPEEWIAQYGLLAGLGTAEEDHVRFSQNQ
VGLLDALLSAQDDFKFDQKFDDMRTQLRDFSGIDDINEPDGFKGELRSYQREGLGWLRFL
QEFSFGGCLADDMGLGKTIQFLALLQDRKRLSPHGPLPSLVVVPKSLIFNWKEEAKRFTP
DLSIIEYVGLERAEQREKFAETDLILTTYGTLRRDILELKDVQFDYVVLDEAQAIKNAGS
QIAKASRLLRAHQRLALSGTPIENHVGDLWSIFEFLNPGMLGRASVFKLHAADSQDAHSR
KTLSQALKPFILRRTKKEVAKELPDKFEQTIHCDMGTEQRKLYDELREHYRASLLGAISR
DGLGKSKMHVLEALLRLRQAACHPALLDRGRVEDSSAKLDALFLHLDELLDEGHKALVFS
QFTSMLSIVRDHLDRRGVVYEYLDGQTRNRQKCVDRFQNDPDCPLFLISLKAGGFGLNLT
AADYVFLLDPWWNPAVESQAIDRTHRIGQTKQVFAYRLICRDTVEEKIAELQSKKRDLAD
AILQADNNIIKTLTVEDLTMLLS
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgggtattacgacgttgatggaaccgaagtttcgtggcgatattcgttatcgcggcgct
gcttatatcaaggcggaacgagtcacaattacgcacgtcaccgtggaccgcatctcggcg
gttgtgagtgacggggtcggatttgaaacgcatatcgatcgcagtaacggcgaagaactg
cagatgtattgcacttgtttcagcggtgaaaaaccgttgatgcactgcaagcatttgtgg
gcgaccattctagcggtcgagtccgaggggctaattggcggaacggtcaagccggggcac
attcctccgtttgctgccgatccttctccctcgttgagtttcgatgcggattgggacgag
gactgggacgatagtgaagtctacgggaccggttcgagtcgtagcaccaagacggtggtc
aaagtcgaaaaggaattgccggcctgggcgcagaaactgcaagccgtcagtgacgccatg
caggtgggcggctcggtgcaggggacttccgccaaggaccgggaaatctttttcgaaatc
gacatcgctgcgagcgatgaagccaaccaattggtcatccaaacatcccagcgcgagcgg
cgtgccaacggccaatggggcaaactaaaacccttaaagttgcgtcccggccaactcgac
gacgtcgaggatgaggaggatcgcaagattctggcctatctggcaggcagcacggcggac
cgcggaaattggcatgcgcggcaagcggaaacacaatcgacatcatttcgctatttggtc
ccttatgaattgtgcgggttggtgctgccgatgatctgcgcatcggggcatgggcgctat
ttgcacggttcagaaaaacatcctgtaccgttggcgtgggatgaggaaccggcttgggaa
ctgtgcctcaacgtaaagttttacgacgagttcgaccaatggcgggtcgacgggtcgttt
cagcgggaaggggacgaaatgcaagtccgtgaaccgcaattgatcgtgccggggggatat
atcttcacggagacgcacatcagtcaattccgggactacggcgtttttgaatgggctcga
cagctgcggggtggcgatcccatttcagttcccaacggtgaagagaacgaactggtcgat
cgactgttcgatatgccgctgctacccaagatgattcttcccgaggcattgcagttggaa
gaggtccgctgtacccccaaaccgcgattaattctccgctccccgcggggcttgaagtgg
caatcgcgtaagttgcaaggggaagtgtttttcaattacgacggaacaaatatccgcgcg
accagtccgcaaggggcggttgtgcaacgcagcgagcggcggtgtattccccgcgatcga
gcggttgaggaacgcgactggaagttgctgagcgaaaacggttttcagcggctactggac
catcggcggcgcaacgccgatgtggaaatcaacgcccgcaaccttggccctggcgtccgt
tcgttggtcggtgaaggttggattgtcgaagcggacggcagtcgcattcaccaaccactg
catatgggctttcagatcaagtcgggcatcgactggtttgaattgcacgcggatgtcgac
tttgatggacgcagcatcgattttccggatctcttatcggccttatcccgcggcgacagc
accgtgcgtttagatgacggttcgctagggatcttgccggaggaatggatcgctcaatac
ggtttgctggccggtttgggaacagcggaagaggatcacgttcgcttttcgcaaaaccaa
gtcggcttgctcgatgcgttgttgtcagctcaggacgatttcaaattcgaccaaaaattc
gacgacatgcgcacgcagttgcgagatttttccggcattgatgacatcaatgaaccggat
ggctttaaaggcgaattgcggtcctatcaacgcgaaggattgggttggctccgctttctg
caagagttttcattcggcggctgtcttgcggacgacatgggtttgggaaaaacgattcag
tttctcgcgctactgcaggaccgcaagcggctgagtccacacgggccgctgccttcgttg
gtggtcgtccccaaatcgctgattttcaactggaaagaagaggccaagcggtttactccc
gatttgtccatcatcgaatatgttggactggaacgggccgaacagcgagaaaaattcgcg
gaaactgatttgatcctgacgacttatggcacgctccgtcgcgatattttggaattgaaa
gacgttcagttcgactatgttgtcctggatgaagcccaagccattaagaatgccgggtcg
caaattgccaaagcatcgcgactgttgcgggcacatcaacggttggctctgagtggtact
ccgattgaaaaccatgttggtgatttgtggtcgatttttgaattcctcaatcccggcatg
ttaggccgggcctctgtgttcaaattacacgctgcggattcccaagacgcccactcacgc
aaaacactgtcacaggcgctcaaaccgtttatcctgcggcgcacgaagaaagaagttgcc
aaggaactgccggacaaattcgagcagaccattcactgcgacatgggcaccgagcaacgc
aaactgtacgacgaattgcgtgagcattatcgtgcctcgttgctcggcgcaatctcgcgg
gatgggctgggcaaatcgaaaatgcacgtgttggaagcattgctgcgactgcggcaggcc
gcctgccatccggcgctgcttgatcgcggccgcgttgaggattccagtgccaagttggat
gcgttgttcctgcacttggacgaattgctggatgaagggcacaaggcactggtgttttcg
caattcacgagcatgctctcgattgtgcgcgaccatctcgatcgccgtggtgtcgtctac
gaatatctggatgggcaaacacgcaatcggcagaaatgcgtcgatcgattccagaacgac
cccgattgcccgctgtttttaatcagcctcaaagcgggtggttttggtttgaacctcaca
gcggctgactatgtctttctgttggacccctggtggaatcccgccgtggagtcacaggcc
attgaccggacgcatcgaatcggccaaaccaaacaggtgtttgcttaccggttgatttgc
cgtgatacggtcgaagaaaagattgccgaactgcagagcaagaaacgagatttggccgac
gccattttgcaagcggataataacatcatcaagacattgacagtcgaagatctgacaatg
ctgttgtcgtag
DBGET
integrated database retrieval system
