Symmachiella dynata: Mal52_36640
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Entry
Mal52_36640 CDS
T06944
Symbol
rpoA_1
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mal52_36640 (rpoA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdyn03021
]
Mal52_36640 (rpoA_1)
03400 DNA repair and recombination proteins [BR:
sdyn03400
]
Mal52_36640 (rpoA_1)
Enzymes [BR:
sdyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mal52_36640 (rpoA_1)
Transcription machinery [BR:
sdyn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mal52_36640 (rpoA_1)
DNA repair and recombination proteins [BR:
sdyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mal52_36640 (rpoA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_1
TPR_2
TPR_8
TPR_16
TPR_19
TPR_6
TPR_12
TPR_14
TPR_7
TPR_11
TPR_10
TPR_17
TPR_CcmH_CycH
ANAPC3
TPR_5
TPR_9
ARM_TT21_N
T7SS_EccA1_N
SAM_EPH
TPR_21
DUF4192
NatA_aux_su
Motif
Other DBs
NCBI-ProteinID:
QDU45174
UniProt:
A0A517ZRS3
LinkDB
All DBs
Position
complement(4580974..4582302)
Genome browser
AA seq
442 aa
AA seq
DB search
MVTVTEMIDVQGILRGRTTFGLDEVRELQEAVTHDQHKDVTQGIRELLEEIEQGDTSLQK
SLAAGIGAYMVGLHADAVNCLQQVKDNGLASYYLANAQVALGQFDEAIKSFDRAIEGGYD
AVQSTLLKAGAVRAVGRIDEAEELLRSVAREGATRAEYSYQYGCIYSDRGDTYGAIEYFE
RAVDIDPHHARALFSLAGINSLHGNDQESIRLYERALSRPPLYLGALLNLGLLYEDSENY
RAAAYCFRKVLEVYPNHERAALYLRDIDASHDMYFDEDVMKSQRRLNQDLMTPVTDFELS
VRSRNCLQKMGVRNLGDLTELSETDLLGGKNFGETSLIEIREMMESKGLRLGQSAPRDKP
RDYQIRNDDLSPQEQALLNRPVADLNLSVRARKCMSRLGINTLAELTSRTPDELLESKNF
GVTSLNEVRRKLTDIGIKLRND
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaccgtgactgaaatgattgatgtgcaagggattctgcgcgggcggacaaccttt
ggtttggacgaagttcgcgaattacaagaagccgtgactcatgaccagcataaggatgtc
acgcaaggaatccgcgagctgctcgaagaaatcgagcagggagacacttcgttacaaaag
agtctcgctgccggtatcggcgcctatatggtcggactgcacgccgatgccgtgaactgc
ctgcagcaagtcaaagacaatggattggccagttattatttggccaatgcccaggtcgct
ttggggcaattcgacgaggccatcaagtcgtttgaccgggcaatcgaaggtggctacgac
gctgtgcaaagcacattgttaaaagccggtgctgtgcgtgccgttgggcggattgacgaa
gctgaagaactccttcgcagcgtcgctcgcgaaggagccacccgcgccgaatattcttat
caatacggctgtatctactccgatcgtggcgacacttacggtgcgattgagtattttgaa
cgtgccgtcgatattgacccacaccatgcccgcgcgttgttctcgctggctggaatcaac
tcgctgcacggaaacgatcaagagtcgattcgactttacgaacgggctctctcacggcca
ccgctgtatctgggagccttgctcaatctgggcttgctctacgaagacagcgaaaactac
cgcgctgctgcctattgtttccgcaaagtgcttgaggtctatcccaatcacgaacgggcc
gcattgtacctccgcgacatcgacgcttcgcacgatatgtatttcgacgaagacgtcatg
aagtcacaacgtcgtttgaaccaagacttgatgacgccggtcaccgatttcgaactctct
gtacgcagccgcaattgcctgcagaaaatgggcgttcgcaacttgggcgacctcaccgaa
ttgtccgaaaccgacctgctcggcggcaagaacttcggggaaacttcgctgatcgaaatt
cgagaaatgatggagtccaaaggtctccggttaggccagtcggcgccgcgcgacaaaccg
cgggactaccaaattcgcaacgacgacctttcgccgcaagaacaggcgttgttgaatcgt
ccggtggccgatttgaatctgtcggtccgggctcgcaaatgtatgtcgcgtttgggaatc
aacacgctggccgagttgacctcccgtacccccgacgaacttctggagagcaaaaacttc
ggcgtgacctcgctcaatgaagtccgacgaaaactgaccgacatcggcatcaagttgcga
aacgactga
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