Symmachiella dynata: Mal52_39740
Help
Entry
Mal52_39740 CDS
T06944
Symbol
lsrB
Name
(GenBank) Autoinducer 2-binding protein LsrB precursor
KO
K10559
rhamnose transport system substrate-binding protein
Organism
sdyn
Symmachiella dynata
Pathway
sdyn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Mal52_39740 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdyn02000
]
Mal52_39740 (lsrB)
Transporters [BR:
sdyn02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
Mal52_39740 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
GGDEF_2
PanZ
Motif
Other DBs
NCBI-ProteinID:
QDU45480
UniProt:
A0A517ZSQ5
LinkDB
All DBs
Position
complement(4952025..4953068)
Genome browser
AA seq
347 aa
AA seq
DB search
MHHTSRLPLRFFQIVATVFLGALFSIGCGQSVEDGAASNDQSDEIVIAMMPKLVGIDYFV
ACEKGAQKAADDLGVKLIYDGPATPSGEEQNNYIDTWIRNGVDAICIAPNQPKRIKPFVD
KARAAGITVLTWDSDAPDSGRQYMVNQVDDKVLGESLMDEIARQMNEEGEWAIAIASLDA
ANLNTWRSYAEARAAEKYPKLKLVETVITKENETEAAQKVGTLLNAHPNLKGIIAFDSNS
VPGAAEAIKRAGKIGQVALTGNSTPGKMRPYIKEGVLESFFLWDPNALGELTVRIAKAAV
EGQELKEGDDIPGYGNLRFSPRDDQTIILSDPIRFTAENIDEYDFGF
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacacttctcgattgccgcttcgtttttttcagatcgtcgccacggtttttctg
ggagccctgttctctatcggttgcgggcaatcggttgaagatggcgcagcctcgaacgac
caatccgacgaaatcgtcatcgccatgatgcccaagttggtgggcatcgattattttgtg
gcttgcgaaaaaggagcgcaaaaggcggccgatgatttgggggtcaagctgatctatgac
ggccccgccacgcccagcggcgaagagcagaataattatatcgatacctggattcgcaac
ggcgtcgatgcaatttgcattgcgcccaatcagcccaaacggatcaagccgttcgtcgac
aaagcgcgggctgcgggaattacggtcctcacctgggacagcgacgcgcctgatagcggt
cggcagtacatggtcaatcaagtcgatgacaaggtattgggtgaatcgctgatggatgag
atcgctcggcagatgaacgaggaaggggagtgggccattgcgatcgccagtctcgacgct
gccaatttaaatacctggcgcagctatgccgaagcccgggcggcggaaaaatatcccaaa
ctgaaattggtcgaaaccgtcatcaccaaagagaacgaaaccgaagcggcgcaaaaagtc
ggcacgctgttaaacgcgcacccgaacctgaaagggatcatcgctttcgattccaattcc
gttcccggagccgccgaagccatcaaacgcgccggcaagatcggccaagtcgctctcacc
ggcaattcgacccccggaaaaatgcggccctatattaaagagggggtcttagaaagtttc
ttcctctgggatcccaacgccctgggcgaactgaccgtccgcatcgccaaggcagccgtg
gaagggcaggaactcaaagaaggggatgacatccccggctacggcaacctccgcttcagc
ccgcgtgatgatcaaaccatcatcctctccgacccaatccgcttcacagcagagaatatc
gatgaatacgatttcggcttttag
DBGET
integrated database retrieval system
