Symmachiella dynata: Mal52_40430
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Entry
Mal52_40430 CDS
T06944
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal52_40430 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdyn03019
]
Mal52_40430 (rny)
Messenger RNA biogenesis [BR:
sdyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mal52_40430 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
dUTPase
HAUS-augmin3
Motif
Other DBs
NCBI-ProteinID:
QDU45549
UniProt:
A0A517ZSS7
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Position
5036736..5038316
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AA seq
526 aa
AA seq
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MGNEITAVLAVSETVTAISAALALIVGLGIGLVIERISRGAAYQRRDEIIEQARQEAENV
KKSQELEAKEELISRREAVEKELNAAREEQREQERRLDRRETTLGELQQDINKKERMIEG
VQTKLADRQKQMDAREAELEQVLREERDQLFQISGLSPEAAQDKLLTQLRVELKNETGAV
ILKHNQELKETCDKLAREAVGMAVQRCAASHASETTVSTVDIPNDDMKGRIIGREGRNIR
AFEKITGVDVIVDDTPGVVIVSAFDTVRREIARLSLAKLIQDGRIHPSRIEEIVNETEKE
MDEHIRTLGNEAIQEAGIVDVHEKLIMLMGRLNFRVSYSQNVRRHSIEVAYLTGLLAESL
GLDGTLARRCGFFHDIGKAADHEMEGGHPAVGAELLKRYGEGPEVVHAAFGHHDDIRVDH
IYTVLVASADAISAARPGARRETLEKYVRRLEELEALACGFPGVDHAYAVQAGREVRCIV
DAKQVNDREAAKMCRDIAKGIEQALTYPGEIKVTVLRETRTIQYAK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgaaattactgcggtgctggcggtatccgaaacggtcaccgccatctccgcc
gccctggctttgattgttggtctgggaatcggactggtcattgaacgaatcagccgtgga
gccgcctaccaacgccgcgacgagatcatcgaacaggctcgacaagaagcggagaacgtc
aagaagtcacaggaactggaagccaaggaagagctgattagccgccgcgaagctgtcgag
aaagaactgaatgcggcgcgcgaagaacaacgcgaacaagaacgccgactcgaccgccgc
gaaaccacgcttggcgaactgcagcaggacatcaacaagaaggaacggatgatcgagggc
gtccagacgaaactcgccgatcgccaaaagcagatggacgcgcgtgaggcggagttggaa
caagtcctgcgcgaggaacgggaccaactgttccaaatcagcggactctctcccgaagcg
gcccaagacaagctgctgacgcaactgcgtgtggaactgaaaaacgaaaccggcgcggtg
atcctgaaacacaatcaggaactcaaggaaacgtgcgacaaattggcccgcgaagcggtc
ggcatggcggtccaacgttgcgccgctagtcacgcctccgagacgaccgtctcaacggtc
gatattcccaacgacgacatgaaaggccgcatcatcggccgcgaaggacgcaacattcgc
gcctttgaaaaaatcaccggcgtggatgtcattgtcgacgacacccccggcgtggtgatc
gtctccgcattcgataccgtccggcgggaaatcgccaggttgtcgctagcgaagctcatt
caagacggtcggattcatccttcacgcattgaggaaatcgttaacgaaaccgaaaaggaa
atggatgaacacatccgcaccttggggaacgaggcgattcaggaagcggggattgttgac
gtccatgaaaagctgatcatgctgatgggccgtttgaatttccgcgtcagctacagccaa
aacgtccgtcggcactcgatcgaagtcgcctatctgaccgggctgttggcggaatccttg
ggactggacggaactttggctcgccgctgcggattcttccacgacatcggcaaggcagcc
gaccacgaaatggaggggggacaccccgccgtgggagccgagttgctcaaacgttacggc
gaaggccccgaggtcgtgcatgcggcatttggacatcacgacgatattcgcgtggatcat
atctacacggtgctcgtcgcttcggccgatgcgatttccgcagcccgtcccggtgcacgc
cgcgaaaccttggagaaatatgtacggcggttggaagaactagaagccttggcttgcggt
tttcccggcgtcgatcatgcctacgccgtccaagcgggtcgcgaagtccggtgtatcgtc
gacgcgaagcaggtcaacgaccgcgaagccgccaagatgtgtcgcgacattgccaaaggt
attgaacaagcactcacgtatcccggtgaaatcaaagtcaccgtgctacgcgaaacgcgg
accatccaatacgcgaagtag
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