KEGG   Symmachiella dynata: Mal52_40430
Entry
Mal52_40430       CDS       T06944                                 
Symbol
rny
Name
(GenBank) Ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sdyn  Symmachiella dynata
Pathway
sdyn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sdyn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mal52_40430 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdyn03019]
    Mal52_40430 (rny)
Messenger RNA biogenesis [BR:sdyn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Mal52_40430 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_PNO1_2nd KH_KhpA-B KH_NusA_2nd dUTPase HAUS-augmin3
Other DBs
NCBI-ProteinID: QDU45549
UniProt: A0A517ZSS7
LinkDB
Position
5036736..5038316
AA seq 526 aa
MGNEITAVLAVSETVTAISAALALIVGLGIGLVIERISRGAAYQRRDEIIEQARQEAENV
KKSQELEAKEELISRREAVEKELNAAREEQREQERRLDRRETTLGELQQDINKKERMIEG
VQTKLADRQKQMDAREAELEQVLREERDQLFQISGLSPEAAQDKLLTQLRVELKNETGAV
ILKHNQELKETCDKLAREAVGMAVQRCAASHASETTVSTVDIPNDDMKGRIIGREGRNIR
AFEKITGVDVIVDDTPGVVIVSAFDTVRREIARLSLAKLIQDGRIHPSRIEEIVNETEKE
MDEHIRTLGNEAIQEAGIVDVHEKLIMLMGRLNFRVSYSQNVRRHSIEVAYLTGLLAESL
GLDGTLARRCGFFHDIGKAADHEMEGGHPAVGAELLKRYGEGPEVVHAAFGHHDDIRVDH
IYTVLVASADAISAARPGARRETLEKYVRRLEELEALACGFPGVDHAYAVQAGREVRCIV
DAKQVNDREAAKMCRDIAKGIEQALTYPGEIKVTVLRETRTIQYAK
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggggaacgaaattactgcggtgctggcggtatccgaaacggtcaccgccatctccgcc
gccctggctttgattgttggtctgggaatcggactggtcattgaacgaatcagccgtgga
gccgcctaccaacgccgcgacgagatcatcgaacaggctcgacaagaagcggagaacgtc
aagaagtcacaggaactggaagccaaggaagagctgattagccgccgcgaagctgtcgag
aaagaactgaatgcggcgcgcgaagaacaacgcgaacaagaacgccgactcgaccgccgc
gaaaccacgcttggcgaactgcagcaggacatcaacaagaaggaacggatgatcgagggc
gtccagacgaaactcgccgatcgccaaaagcagatggacgcgcgtgaggcggagttggaa
caagtcctgcgcgaggaacgggaccaactgttccaaatcagcggactctctcccgaagcg
gcccaagacaagctgctgacgcaactgcgtgtggaactgaaaaacgaaaccggcgcggtg
atcctgaaacacaatcaggaactcaaggaaacgtgcgacaaattggcccgcgaagcggtc
ggcatggcggtccaacgttgcgccgctagtcacgcctccgagacgaccgtctcaacggtc
gatattcccaacgacgacatgaaaggccgcatcatcggccgcgaaggacgcaacattcgc
gcctttgaaaaaatcaccggcgtggatgtcattgtcgacgacacccccggcgtggtgatc
gtctccgcattcgataccgtccggcgggaaatcgccaggttgtcgctagcgaagctcatt
caagacggtcggattcatccttcacgcattgaggaaatcgttaacgaaaccgaaaaggaa
atggatgaacacatccgcaccttggggaacgaggcgattcaggaagcggggattgttgac
gtccatgaaaagctgatcatgctgatgggccgtttgaatttccgcgtcagctacagccaa
aacgtccgtcggcactcgatcgaagtcgcctatctgaccgggctgttggcggaatccttg
ggactggacggaactttggctcgccgctgcggattcttccacgacatcggcaaggcagcc
gaccacgaaatggaggggggacaccccgccgtgggagccgagttgctcaaacgttacggc
gaaggccccgaggtcgtgcatgcggcatttggacatcacgacgatattcgcgtggatcat
atctacacggtgctcgtcgcttcggccgatgcgatttccgcagcccgtcccggtgcacgc
cgcgaaaccttggagaaatatgtacggcggttggaagaactagaagccttggcttgcggt
tttcccggcgtcgatcatgcctacgccgtccaagcgggtcgcgaagtccggtgtatcgtc
gacgcgaagcaggtcaacgaccgcgaagccgccaagatgtgtcgcgacattgccaaaggt
attgaacaagcactcacgtatcccggtgaaatcaaagtcaccgtgctacgcgaaacgcgg
accatccaatacgcgaagtag

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