Symmachiella dynata: Mal52_45500
Help
Entry
Mal52_45500 CDS
T06944
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn03030
DNA replication
sdyn03430
Mismatch repair
sdyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mal52_45500 (dnaE)
03430 Mismatch repair
Mal52_45500 (dnaE)
03440 Homologous recombination
Mal52_45500 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdyn03032
]
Mal52_45500 (dnaE)
03400 DNA repair and recombination proteins [BR:
sdyn03400
]
Mal52_45500 (dnaE)
Enzymes [BR:
sdyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mal52_45500 (dnaE)
DNA replication proteins [BR:
sdyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mal52_45500 (dnaE)
DNA repair and recombination proteins [BR:
sdyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mal52_45500 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QDU46053
UniProt:
A0A517ZU95
LinkDB
All DBs
Position
complement(5704146..5707646)
Genome browser
AA seq
1166 aa
AA seq
DB search
MNDARPFVHLHCHTHYSLLDGASKIPALVQQAKDMGMNSLAITDHGNLFGALEFYQTCQR
EGIKPILGYEAYIAPGSRFDRNASRMKEASFHLTLLAKNYTGFKNLVKLASAAYLEGFYY
KPRIDKELLERHREGLICLSGCAAAELSQQILGERMQEADNTIQWFHKMFGEDYYLEIQN
AGLEIQKICADATVDFANKKGLPLVATNDSHYLCEDDAAAHDVLLCVNTKSYRSDTRRMK
MEGSQFFVRSPEEMYAAFPDHADAVARSQEIADKVDIQIDLTARHYPVFKPPEGKTDVEY
LRELCTNGIEWRYGKDADQKYFDRLDYELSIIERMGYSSYFLIVWDFVRFSRSKGIPNLA
RGSACGAIVAYVLGLSNVCPLEYDLLFERFLDPNRAEAPDIDIDFCRDGRADVLNYVKEK
YGEANVAQIGTFGTLKAKAAVRDVARVLSIPIDRVNQVAKMIPETLGIKLKDAIEESGEL
KAVYNSDPEIKEVLDFAMRLEGLARNVGTHAAGVVIADRPLDEYVPLQKITGKEDILTQW
TDVETAGLLKMDFLGLRNLTILDKAVKNVKKHAGHDIDPSKFPLDDKETFALLQRGETKG
IFQLESGGMRDLLQKMRPDRFEDIIATSALYRPGPLEGGMVMTYVDVKNGRMDPPTVHPV
VDEILAETYGVMVYQEQVMRILNRLGNIELSSSYQCIKAIGKKKLAVIAKYREEFLNGAV
ENNMDRKQAEELFQMIEFFAGYGFNKSHSTAYGAIAYQTAYLKAHYPWEFMAALLSCGME
SSDRINEHMDDARRMNIKVYPPDVNQSVEEFGVIEDGLTFGLNAIKGLGESNTKAIVEER
QANGPYKSIFDLAERVDPKNMTKGTLEILIKAGGLDNLDGTRAQQMAVVERAVQGAAAIH
RDKASGQKSLFGDDEPEETTADEPVCTLPEVPDWQHAQQLAFEKEVFGFYLTSHPLTESA
AVLNLYATHTTSDLHALDDKAEVLLGGIINSVKMAATKKPSTNGHSRYANFDFEDVQGIV
RCICWPEDYARYEELIKPEMICFIRGRVDRRGREPNLIVNEMVTIEDAKRKFTEQVAIKF
QSGLHSDQDVERVHDVLRRHPGKCEVVLVVESVDQEDRSRQVRFILSTPPEMRVSGDPRV
AAELQDVVGQANVRLHGARRRRRRTG
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgcacgtccctttgttcatctgcattgccacacccactacagcttgctcgac
ggtgccagcaagattcctgctttggttcaacaagccaaagacatgggcatgaattcgctg
gcgatcaccgatcacgggaatttattcggcgcgttggagttctaccaaacctgccaacgc
gaagggatcaaaccgatcctaggctacgaagcctatatcgcccccggcagccggtttgat
cgcaatgcgtcgcggatgaaagaggcgagtttccacctcacgctgttggccaaaaactac
accggtttcaaaaatctggtcaagctggcatcggcggcctatttggaggggttttattac
aagcctcgtatcgacaaggaactgctggaacgtcatcgcgaaggattgatttgcctttcc
ggatgtgcggcagcggaattgtcgcagcaaatccttggcgaacggatgcaggaagccgat
aacacgattcagtggtttcacaagatgttcggcgaggactattacctcgagattcaaaat
gccggtttggaaattcaaaaaatctgtgccgatgcaacggtcgacttcgccaacaaaaaa
ggcctgccgctggtggcgacgaacgactcgcattatttgtgcgaggatgacgcggctgct
cacgatgtgctgctgtgcgtgaataccaagagctaccgcagcgacacgcggcgaatgaag
atggaaggctcacagtttttcgtccgctcgcccgaagagatgtacgctgccttccccgat
cacgccgacgccgtggcccgcagtcaggagatcgccgacaaggtcgatattcaaattgac
ctaaccgcgcggcactatcccgtattcaaaccgcccgaaggtaaaaccgacgtcgagtac
ctccgtgagttgtgcaccaatggcattgaatggcggtatggaaaggatgcggaccagaaa
tattttgaccgcttggattacgagctgagcatcatcgagcggatggggtattcgagttac
tttttgatcgtgtgggacttcgtccgcttttcccggtccaagggcatcccgaatctggca
cgcggttcggcgtgtggagcgatcgtggcctatgtgttggggctgagcaacgtttgcccg
ttggaatatgacctgctgttcgagcggtttctcgatcccaaccgggctgaagcgcctgat
atcgatatcgacttctgccgcgacggccgcgcggacgtgctcaactatgtgaaggaaaaa
tatggcgaagccaacgtcgcccaaattggtacgttcggcacgctgaaagccaaagcggcg
gtccgcgacgtggcgcgggtgctgagcatccccatcgaccgcgtgaatcaagtcgccaaa
atgattcctgaaaccttgggaatcaaactcaaagatgccatcgaagagagcggcgagttg
aaagcggtttacaactccgacccggaaatcaaagaggtgctggacttcgcgatgcggttg
gaaggtttggcacgcaacgtcggaacccacgccgccggtgtagtgatagccgaccggccg
ttggacgagtatgtgccgctgcagaaaatcaccggcaaagaggacatcctcacgcagtgg
accgacgtcgagactgccggactgctgaagatggactttttgggactgcggaatctgacg
attctcgacaaggcggtcaaaaacgtcaaaaagcacgccggccacgatattgatccctcc
aagtttccactggacgacaaggagacgtttgcactgctgcaacggggcgagaccaagggc
atcttccagctggaaagcggtgggatgcgggacctgttgcagaaaatgcgtcctgaccgg
tttgaagacatcatcgccacgtcggccctgtatcgccccggcccgttggaagggggcatg
gtgatgacctacgtcgacgtgaaaaacgggcgcatggatccaccgaccgtgcacccggtg
gtcgacgagatcctggctgagacgtacggggtgatggtctaccaagaacaggtgatgcgg
attctcaaccggttggggaatatcgaactttcgtcgtcgtatcaatgtattaaggcgatc
ggtaagaaaaagctggctgtgattgccaagtaccgcgaggagtttttgaacggggcggtc
gaaaacaacatggatcggaaacaggcggaagaactgtttcagatgatcgagttcttcgcc
ggttacgggttcaataaatcacactccacagcctacggagcgattgcttatcagacggcc
tacctcaaggcgcattatccctgggagttcatggcggcgctgttgtcctgcggtatggaa
agttccgaccgcattaacgagcacatggacgatgcgcggcggatgaacatcaaggtgtat
ccccccgatgtgaatcaatcggtggaagaatttggcgtcatcgaagatggattgacgttt
ggattgaatgccatcaaaggtctcggtgaaagcaataccaaggccatcgtcgaggaacgg
caggccaacgggccgtacaagagcatcttcgatctcgccgaacgggtcgatcccaaaaac
atgaccaaagggacgttggaaatcctcatcaaagccggagggctggacaacctcgacggc
acccgcgcacaacaaatggccgtggtcgaacgagcggtgcagggggcggctgcgattcat
cgcgataaagccagcggtcaaaaaagcttgttcggcgacgacgaaccagaggagaccacc
gcagacgaaccggtctgcactttgccggaggtaccagactggcaacacgcgcagcaactt
gcctttgaaaaagaggtttttggattttatctgacgtcacatccgttgacggaaagtgcg
gccgtcttgaatctgtatgcgacgcacacgaccagcgacctgcatgccttggacgataaa
gccgaagttctgttggggggcatcatcaattcggtgaagatggcggccaccaaaaaaccg
agcaccaacggccattcccgctacgccaactttgatttcgaggatgtccagggcattgtg
cggtgcatttgctggccggaagattatgcccggtatgaggaattgatcaaaccggaaatg
atctgctttattcgcgggcgagtcgatcggcgcggtcgcgagccgaatttgatcgtcaac
gaaatggtgaccatcgaggatgccaaacggaagttcaccgaacaggtggcgatcaaattc
caaagcggcctccacagcgaccaagatgtcgaacgcgtacatgatgttctccgccggcat
cccggcaaatgcgaagtcgtgctggtcgtcgaatcggtcgatcaggaagatcgttcgcgg
caggtgcggtttatcctctcaacgcccccggagatgcgcgtttccggcgatccccgcgtc
gcagcggaattgcaggatgtcgtcggtcaggcaaatgtccgcttacacggcgcgcggcgt
cgacgtcggcggaccggttaa
DBGET
integrated database retrieval system
