Symmachiella dynata: Mal52_46270
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Entry
Mal52_46270 CDS
T06944
Symbol
groL_2
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal52_46270 (groL_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdyn03019
]
Mal52_46270 (groL_2)
03110 Chaperones and folding catalysts [BR:
sdyn03110
]
Mal52_46270 (groL_2)
03029 Mitochondrial biogenesis [BR:
sdyn03029
]
Mal52_46270 (groL_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdyn04147
]
Mal52_46270 (groL_2)
Enzymes [BR:
sdyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Mal52_46270 (groL_2)
Messenger RNA biogenesis [BR:
sdyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Mal52_46270 (groL_2)
Chaperones and folding catalysts [BR:
sdyn03110
]
Heat shock proteins
HSP60 / Chaperonin
Mal52_46270 (groL_2)
Mitochondrial biogenesis [BR:
sdyn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Mal52_46270 (groL_2)
Exosome [BR:
sdyn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mal52_46270 (groL_2)
Exosomal proteins of other body fluids (saliva and urine)
Mal52_46270 (groL_2)
Exosomal proteins of breast cancer cells
Mal52_46270 (groL_2)
Exosomal proteins of colorectal cancer cells
Mal52_46270 (groL_2)
Exosomal proteins of bladder cancer cells
Mal52_46270 (groL_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Cro
Motif
Other DBs
NCBI-ProteinID:
QDU46130
UniProt:
A0A517ZUJ0
LinkDB
All DBs
Position
5805316..5806932
Genome browser
AA seq
538 aa
AA seq
DB search
MAKQLLFDDRAQLKLQRGVRTLADTVAVTMGPTGRNVVIDKSFGNPVVTKDGVTVSKEIE
LDDPFENMGAKLVNEVATKTSDIAGDGTTTATVMARAVFEAGLRSITMGANPMVVRRGIE
KAADAVLAYFAETSKPVSSKEEIAQVGCISANNDRPVGDLIADAMEQVGRDGVITVEEGK
GNETTLTLAEGMQFDKGYISPYFVNDPETMKVELEDCYILLFEKKISNLRELVPLLEKIS
QSSKPLLIVAEDVDGEALTALVVNRLRGVLNVAAVKAPGFGDRRKAMLADMAVLTGGTLI
SEELGITLESVELNQLGRCKKVEIDKDSTTLIEGGGDSEAIKTRVQQIRTQIENTDSEYD
REKFQERLAKLTGGVAIISVGAATESEMKQTKARMEDALHATRAAVEEGILPGGGVAYLR
AIEAAKSVKAKGDEKIGVAIVAKALEAPIRQIAENCGEDGAVIADEVRQKGENIGYNAQA
GEYVDMFKAGIIDPTKVVRSAVQNSTSIAGLMLTTEVLVTRTDDLEGGDKKAVEGSIR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaacaattactttttgatgaccgcgcgcaactcaagttgcagcgcggagtacgg
acgctggcggacaccgtcgccgtcaccatgggaccgactggccggaacgtcgtgatcgac
aaaagcttcggcaatcccgtcgtgaccaaagatggcgtgaccgttagtaaagaaatcgaa
ctggacgacccgtttgaaaacatgggcgccaagttggtcaatgaagtcgccaccaaaacc
agcgacatcgccggcgatggcacgaccaccgcgaccgttatggcgcgtgccgtgttcgaa
gcgggactgcgaagcattacgatgggagcaaatcccatggtcgttcgccgcggtattgaa
aaagcggccgatgccgttttggcctatttcgccgaaacgtcgaagccggtctccagtaaa
gaagagatcgcccaagtcggctgtatctcggccaacaacgaccgtccggtgggtgacttg
attgccgacgcgatggagcaagtcggacgcgacggtgtgattactgtcgaagaaggcaaa
ggcaacgaaaccacactgacgctggctgaggggatgcaattcgataagggttacatctcc
ccctacttcgtcaacgatcccgaaaccatgaaagtggaattggaagattgttatatcttg
ctgttcgagaagaaaatctcgaacctgcgggaactcgtgccgctgttggagaaaatttca
caatccagcaagccgttgttgatcgtcgctgaagacgttgacggcgaagcgttgaccgca
ctggtcgtcaaccgcctgcgtggcgtgttgaatgtggcagccgtcaaagcccccggtttt
ggtgatcgccgcaaagccatgttggccgacatggccgttttgaccggtggcacgctgatc
tccgaagagttgggcatcaccttggaatcggtcgagttgaatcaacttggccgttgcaaa
aaggttgaaatcgacaaagattccacaaccttgatcgaaggtggcggagactccgaagcg
atcaaaacccgcgtgcaacaaatccgcactcaaatcgaaaataccgatagcgaatacgat
cgcgagaaattccaagaacgtctggccaagttgaccggcggcgtggcaattatctccgtc
ggagccgctaccgaatcggagatgaaacagaccaaggcacgcatggaagatgccctgcac
gccacacgggcggctgtcgaagaaggcattcttcccggcggtggtgtcgcttacttgcgg
gcgatcgaagcagccaaaagcgtcaaagccaaaggggacgaaaagatcggcgtcgccatt
gtggccaaagcacttgaggctccgattcgccagatcgctgaaaactgcggcgaagatggc
gcggtgatcgccgacgaagtccgccaaaaaggcgagaacatcggctacaatgcccaggca
ggtgaatatgtcgacatgttcaaggcgggcatcattgatccgaccaaagtggtccgcagt
gccgtccagaactcgacatcgatcgccggcttgatgctgacgaccgaagtcttggtcaca
cggactgacgacctcgaagggggcgacaagaaggcggttgaaggtagtatccgctaa
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