Symmachiella dynata: Mal52_50410
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Entry
Mal52_50410 CDS
T06944
Name
(GenBank) DNA-dependent helicase II
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sdyn
Symmachiella dynata
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdyn03400
]
Mal52_50410
Enzymes [BR:
sdyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mal52_50410
DNA repair and recombination proteins [BR:
sdyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Mal52_50410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QDU46520
UniProt:
A0A517ZVM6
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All DBs
Position
6277586..6280927
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AA seq
1113 aa
AA seq
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MTAEIQVLTGPASSGKTGRMLGRYRAHLHDAADKLEIGRGLWLTPTHYSAAFIRENLLAD
DLAACFNPQVFTFSGFADRVLRDSPAAVTPISRMLQRVLVRGIIEKLNADNALRHFSPIA
VTTGFIDQVLAFISELKQAEIWPEHFEEVIAGDNPHPRDAELAMIYRVYQQHLLAHELYD
GEGRFWSARDQLTQGHWGTFADLDFVVVDGFSDFTKTQYEILQLLAGKVTEMFVTLPLES
PLQRADLFAKPLGALKQLELHTNVQRDKCVEIDENCPAAFSQIAAKLFQNPRDVVPCGTA
ADVSVIEATGQQGEVRAMASQIKTLLAAGTAPMDIVVTFRSMTDYADLLHETFTNAGIPY
ICKSSESLATSPVIKALMALLQVATEDWPFERLLPLLQNNYFHPDWPEYAEGEATRDVAA
QLRRLQLRGGRREILKRIYRAAQPSETDELLSGSKLEKRRVQQQSAAAAGDFLTRLATTL
EPLQKQHTRSGWAEILVRIGREMRFDPRTLPALTDEGERDMRARDTDAWQAFENMLYAAA
GFDERVHENGHSIDFPRMLTELTDLIHQTELLNRDSAVGKVRVLDATQVRNLDIPILFVG
GLTETGFPQRRGDDCFFSEADRRDFNERGLPLQHRTSRTQDEMLLFYGVVTRARQRLILS
YPAMNSTGQPLLPSPYLLTLQHLFDEGAVPILRRMELDPVPPISEMLTEADLRVVAVEQA
LNKDAGPLRSLSELPGHEPLVRNILAAATMADHRFRIHGFTPYEGLIPSAKHQILLGKRY
SIAHEFSATELEAYANCPFQYFAGHILNVNTLDAPEVKTDYKQRGNVVHDVLKKLHQQYL
AVSTENGDAPPSDEELSAQFDELLQTLLRQHADDPKLMQTLTEIETRLLSEWGEEYARQW
AEYSKDSEKNWDEPPQPVRYEVGFGAAPGGDPATDAAETAECLVLGVAHRAVRIRGRIDR
IDVGEIAGTPAFNVVDYKTGTSTKFTAKKISEGGLIQLPLYAMAAERLGMVAAGAQPMEL
GYWFVKETGFKSKLTAGQVNEGEFTASEVWEHLQATLEESIPQMAAGIRRGQFPVYNEDT
NCTTNCPFSTTCRVGQIRPLADTLHKTWKLSDQ
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgagattcaagtattaaccggtccagcgagcagcggcaaaacaggccgcatg
ctggggcgataccgcgcccatttgcacgatgcggccgacaagctagaaatcggtcgcggc
ctgtggctgacgccgactcattacagcgcggcgttcatccgcgaaaatctgttggccgac
gatctggctgcctgtttcaatccgcaggtgttcacgttttcggggtttgcggaccgcgtg
ttgcgcgacagtcccgcagcggtcacaccgatttctcgcatgctgcaacgggtgcttgtc
cgcggcattatcgaaaagttgaacgccgacaatgcgctgcggcatttctcgccgattgcg
gtgacgaccggattcattgatcaggtgttggcattcatcagcgagttgaaacaggcggag
atttggccggaacattttgaagaggtaatcgccggcgacaacccgcatccccgcgatgcg
gaactggcgatgatttatcgtgtctatcaacagcacctgctggcgcatgaattgtacgac
ggggaaggtcggttttggtcggcccgcgatcaactcactcaagggcattggggaacattt
gctgatttggactttgtggtcgtcgacgggtttagcgacttcaccaaaacccaatacgag
attctccagctattggcaggcaaggtgacggagatgtttgtcaccctgccgctggagtcg
ccgttacagcgtgcggacctgttcgccaagccgctcggtgcgttaaaacaactcgagcta
cacacgaacgtgcagcgtgacaaatgtgtcgagatcgacgaaaactgtccggctgctttt
tcccaaatcgccgcgaaactatttcaaaatccccgtgacgtcgtgccgtgcggaaccgct
gcggatgtttctgtgatcgaagcaaccgggcaacagggtgaggttcgcgcgatggcctcg
cagatcaaaacgctattggcggccgggacagcgccgatggatattgttgttactttccgg
tcaatgacggattatgccgatttgctgcacgaaacgtttacgaacgccggtattccttac
atctgcaagtcatccgagtcgttggccaccagtcccgtgatcaaggccttgatggcgctg
ttgcaagtcgccaccgaggattggccgtttgaacggctcttgccgctgttgcagaacaac
tactttcatcccgattggcccgagtatgcggaaggggaggcaacgcgggacgtggcggcg
cagttgcggcggctgcaattgcgcgggggacggcgcgagattctcaaacggatctaccgt
gccgctcaaccgtcagaaaccgacgaattgctttccggctcgaaattggaaaaacgccgc
gtccaacagcaatcggccgcagcggcgggagattttttgacgcgattggcgacaacttta
gaaccgctgcaaaaacagcatacccgcagcggttgggcggagatcctggtccggatcgga
cgggaaatgcgtttcgacccacggacgctgccggcgctcaccgatgagggggagcgtgac
atgcgtgcgcgggatacggatgcctggcaggcgtttgagaacatgctgtatgcggcggca
ggatttgatgagcgtgtccatgagaatggtcactcgattgatttcccacggatgctcact
gaactgacggatctgattcatcagacggaacttttaaaccgtgactcggccgtgggtaag
gtgcgcgtgctggatgcgacgcaagtccgcaacctggacattccgattttattcgtgggc
ggattgaccgagacgggatttccgcagcggcgcggggacgattgttttttcagcgaagcg
gatcgccgtgatttcaacgaacggggcctgccgctccagcatcgcacatcgcggacgcag
gacgagatgctgctgttttacggagtcgtgacccgcgcccgccaacggttgatcttgagt
tatccggcgatgaattccaccggacaaccgctcctgcccagcccctatctgctcacgctg
caacatctgttcgacgaaggggccgtcccgattctgcggcggatggaactcgatccggtg
cccccgatttcggagatgctcaccgaggcggacctccgcgtcgtggctgttgagcaagcg
ctgaacaaggacgccggtccgctgcgttcactgtctgagttaccgggacacgaaccgctg
gttcgtaatattctcgcagcagcaacgatggccgaccaccgcttccgcattcacggtttc
acgccctacgaaggtctgattcccagcgccaagcatcagattctattaggcaaacggtat
tcgatagcccacgaattcagtgcgacggaattggaagcatacgcgaattgtccgtttcaa
tatttcgcgggacatattttaaacgtgaacacgctcgatgccccggaggtaaaaacagat
tacaagcaacggggaaatgtggtgcacgatgtgcttaagaaattgcaccagcaatatctc
gccgtgagtacggaaaatggcgacgcccccccatcggacgaagagttgtccgcacaattc
gatgagctactgcagacgttgttgcggcaacacgcggatgatccgaaattgatgcagact
ttaaccgaaatcgaaacgcgactgctgtcggaatggggtgaggaatacgccaggcaatgg
gccgagtattccaaggattcggagaagaattgggacgaaccgccgcaaccggtgcgatac
gaggtcggattcggcgctgcaccggggggtgatccggcgacggatgctgcggaaacggcc
gaatgtttggtgttgggcgtcgcacatcgggcggtgcggattcgtggacggattgatcga
atcgacgttggagaaatcgcgggaacgccggcgtttaacgtggtggattataaaaccggg
acctcgaccaaattcacagcgaaaaaaatctcggaaggaggtttgattcaattgccgttg
tatgcgatggctgctgagcggttgggaatggtcgccgccggcgcgcaaccgatggaactg
ggctattggttcgtaaaggaaaccggattcaaaagtaagctcaccgccgggcaggtcaac
gaaggggaattcacagccagcgaagtctgggagcatttgcaggcgacgctcgaagaatca
attccgcaaatggcagcgggaattcgtcgcggacaattcccggtttacaacgaggacaca
aattgcacaacgaactgtcctttcagtacgacttgccgtgtggggcaaatccggccgttg
gccgacacgctgcataaaacttggaaactcagcgatcaataa
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