Symmachiella dynata: Mal52_53010
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Entry
Mal52_53010 CDS
T06944
Symbol
hrdB_2
Name
(GenBank) RNA polymerase principal sigma factor HrdB
KO
K03086
RNA polymerase primary sigma factor
Organism
sdyn
Symmachiella dynata
Pathway
sdyn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mal52_53010 (hrdB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdyn03021
]
Mal52_53010 (hrdB_2)
Transcription machinery [BR:
sdyn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mal52_53010 (hrdB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r1_2
Flg_hook
Asp_decarbox
Motif
Other DBs
NCBI-ProteinID:
QDU46779
UniProt:
A0A517ZWB6
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All DBs
Position
6592744..6593742
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AA seq
332 aa
AA seq
DB search
MNCNLSQFHAPRPDSKCLELLQSTAPASHPDCAAIYQKISGIKIEFVACEMFSVPAAQEK
ILAPAPLAQDTAHERFLNESVKKPPSGIPPYLASLYETPLLTPEQEFHLFRKMNFYNFRA
AELRDSVEAAPATATYRQLDTIEGLLQQAHAIRNQIVQANLRLVVSIARRFVDAANSFED
LVSEGNVPLIRAVEIFDYTRGYRFSTYATWAIRNSFVRLTPRSRRRSARYLTGTQELFDE
FSDAGISPTEYEREHRQMTTLVSSMLASLDNRERSIVMSRFGLDGSGTKKKFREISSQLE
ISTERVRQIVARALAKLRTTLAESGNDCFDLH
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcaatctttcacagtttcatgcgccccgtccggattcaaagtgcctggaatta
ctccagagcaccgcaccagcctcgcacccggattgtgctgcgatctaccaaaaaatttca
ggcatcaagatcgaatttgttgcctgcgaaatgttttccgttcccgccgcccaggaaaaa
attctagcgccggccccacttgcccaggacacggcccatgaacgattcctgaacgaatcg
gtcaagaaacccccgtccggcatccctccctatctggcgagtctctacgagacaccgcta
ctgactccggaacaggaattccacctgtttcggaagatgaatttctataacttccgggcc
gccgagttgcgtgactccgtcgaagccgcacccgccactgccacttaccggcaactcgat
accatcgaagggctactgcagcaggcacacgcgattcgcaatcaaattgtgcaagccaac
cttagattggtggtttcgatcgcccgccgttttgtcgatgcggccaattcgttcgaagat
ctcgtcagcgaaggaaacgtgcctttgattcgcgccgtcgaaatctttgactacacgcgc
ggctaccgcttcagcacctatgccacttgggcgattcgtaacagtttcgtacggctcacg
ccgcgcagtcggcggcgttcggcgcggtatctcaccgggacccaagagttattcgacgaa
ttctccgacgcaggcatcagcccgaccgaatacgaacgcgagcaccgtcaaatgaccaca
ctggtctccagcatgctagccagtctcgacaaccgcgaacgttcgatcgtcatgtcccgt
ttcggcctcgatggatcgggaaccaaaaagaagttccgcgaaatctccagccaattggaa
atcagcaccgagcgggtccgccagatcgtcgcccgcgccttggctaaactccgcacgacc
ctcgccgaatccggcaacgactgcttcgatctccactag
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