Symmachiella dynata: Mal52_54500
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Entry
Mal52_54500 CDS
T06944
Symbol
sigA_4
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
sdyn
Symmachiella dynata
Pathway
sdyn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mal52_54500 (sigA_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdyn03021
]
Mal52_54500 (sigA_4)
Transcription machinery [BR:
sdyn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mal52_54500 (sigA_4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
HTH_23
HTH_29
HTH_17
HTH_38
MerR
Mor
MerR_1
Sigma70_r1_2
HTH_Tnp_ISL3
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
QDU46922
UniProt:
A0A517ZWQ1
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Position
complement(6775970..6777634)
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AA seq
554 aa
AA seq
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MSRYRNPAIRQLTEQQVRYTPRDARLRQIERAEQLLEEIDLDKEYHYNDLCEKITTYKAE
MYPHLVLSGADAAHDVRLFVEDLSDSADIAVESLAEPVLTVGDVSEQFNVSTKTVDRWRS
KGLVSRRFKFGNRKRIGFLKSSVDRFVRRNSDDVHRSTRFSQLSVEEREDIITRARRFAR
AGGCPAEISRRIAKRLGRSPETIRYTLKHYDAEHPETAVFPHASGPLTDEGKKQIYRNFR
RGIPVERLAKQFCRTKASIYRIVSEMRAQRLIAQPIDFIDSEDFVRDDADKLILGPVPVV
EKKAAAFKPPPGLPPYLASLYRVPLLTKEEEVYYFRKMNYLKFKAAELRGSLDSRKAKSK
EMDAIEKLLNEAVSVKNLLIRSNLRLVVSIAKRHFRPNTNFFEMVSDGNMSLMRAIEKFD
YSRGNKFSTYATWAIMKNFARSIPAEHTRLDRFRTGNEEVFQAKSDTRSVPFELELNNQR
QHEAIMSILSQLDDREKDIILFRFGLNQGTEPQTLEQVGYHFGVTKERIRQLEARALNKL
RKIAQEARLDIPGV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctatcgtaatccggcaattcgacaacttaccgagcagcaagtccgctataca
ccgcgcgacgctcgccttcggcagatcgaacgcgccgaacaacttctcgaagagatcgat
ctcgacaaagagtatcactacaacgatctctgtgagaaaatcacgacctacaaggccgag
atgtatccgcatttggtcctctccggggcggatgcggcgcatgacgtgcgcttgtttgtc
gaagacttatcggacagcgcagatattgccgtcgagagccttgcggagccggtactcacg
gtgggtgatgtcagcgaacaattcaacgtctccacgaaaaccgttgatcgttggcggagc
aagggtttggtgagtcgccgctttaagtttggtaaccgtaagcggatcggcttcctgaaa
tcctcagtggaccgttttgtgcgacgcaattccgacgatgtgcaccgcagcacgcgcttc
agccaactttcggtggaggagcgtgaggacatcattacgcgcgcacggcgttttgctcgc
gctgggggatgcccggcagaaattagtcggcgtattgccaagcgattggggcggtccccg
gaaacgatccgttacacactcaagcattatgacgccgagcatccggaaacggcggtcttt
ccgcacgccagcggtccgttgaccgacgaaggcaagaagcagatctaccgcaatttccgc
cggggaatccctgtggagcggttggccaagcagttctgccgcaccaaggcgagtatttac
cgaattgtatcggaaatgcgggcgcaacggctgattgctcaaccgatcgatttcatcgac
agcgaagatttcgtacgggacgatgccgacaagttgattctcggaccggtccccgtcgtc
gagaagaaagcagctgcatttaagccgccgccaggcttgccgccttatttggccagccta
taccgcgtgccgctgctgaccaaggaagaggaagtctactacttccgtaaaatgaactat
ctgaagtttaaagcggccgagttgcgcggcagcctggattcgcgaaaagccaaatcgaaa
gaaatggacgcgatcgagaagctgctcaatgaggccgtttcggtcaagaacctgctcatt
cggagtaacttgcgattggtcgtctcgattgccaagcggcattttcgaccaaatacgaat
ttcttcgaaatggtcagcgatgggaatatgtcgctgatgcgggcgattgaaaaattcgac
tacagtcgcgggaataagttctccacctacgccacctgggcgattatgaagaacttcgcg
cgatcgatccccgccgagcacacccgtttggatcgtttccgtaccggaaacgaagaggtg
ttccaggcaaaatcggacacgcgttctgttcccttcgagttggagttgaacaatcaacgc
cagcacgaagcgattatgagtatcctgtcgcaactggacgaccgggaaaaggacatcatt
ttgttccgtttcggactgaatcagggaaccgagccgcaaacgctggagcaggtcggttac
catttcggtgtgacgaaggagcgaattcgacaattggaagcgcgggccttaaataagttg
cgaaaaattgcccaggaggcccggctcgacattccgggagtctaa
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