Symmachiella dynata: Mal52_55250
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Entry
Mal52_55250 CDS
T06944
Symbol
lcfB_5
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn00061
Fatty acid biosynthesis
sdyn00071
Fatty acid degradation
sdyn01100
Metabolic pathways
sdyn01212
Fatty acid metabolism
sdyn02024
Quorum sensing
sdyn04146
Peroxisome
Module
sdyn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Mal52_55250 (lcfB_5)
00071 Fatty acid degradation
Mal52_55250 (lcfB_5)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Mal52_55250 (lcfB_5)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mal52_55250 (lcfB_5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sdyn01004
]
Mal52_55250 (lcfB_5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdyn04147
]
Mal52_55250 (lcfB_5)
Enzymes [BR:
sdyn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Mal52_55250 (lcfB_5)
Lipid biosynthesis proteins [BR:
sdyn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Mal52_55250 (lcfB_5)
Exosome [BR:
sdyn04147
]
Exosomal proteins
Exosomal proteins of breast milk
Mal52_55250 (lcfB_5)
Exosomal proteins of breast cancer cells
Mal52_55250 (lcfB_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QDU46997
UniProt:
A0A517ZWX8
LinkDB
All DBs
Position
complement(6878749..6880437)
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AA seq
562 aa
AA seq
DB search
MAVTSQRTKIEKRSRTAPWLDHYPEGVPASLEYPQIPAWGFLERTAADYGDRVACHYYNQ
RMTYAELFAAARQMAHVLVKSGIKPGDRVGVLLPNTPEMLVALNGIWMAGGVVVAVSPLM
VAGEVTALLKTTQCKTVIGLDMLLPLLFDGEYQPESVLLTTIADRLPLLQKWGYKAARIV
RLGIRSKARDKRCRDLAKELAQGNPIFQPIQQHSLDDPAFILPTGGTTAAPKAVVLSHRN
LVANAWQLHHWGGATMAEETVLAVVPFFHSYGLTTCAMTGTAMAATLVLQHRFVPRRVLR
AIETARPSVFHAVPAMLCQLNKLMRDGKGDYTSINYCMSGGAPLPTSVAEEFTEHTGAIV
VEGYGLSEASPVTHAGPLDGSARAGTIGMPLPDTEVRIVDADTGFRPVAPGEVGEITVRA
PQVMVGYWNNPEATSSAIRDGWLYTGDLAVCDDQGFFRIVDRKKDLIITSGFNVYPSDVE
RVIKQFSGIQDAAVVGVSDPDRGEVVKAILVLERGVQFDRKEFLNQCKIHLAKHKQPRMI
EIAEGDLPRNFLGKVLRKDLRT
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccgtaacttcccaacgcaccaaaatcgaaaaacgatcacggactgctccgtggttg
gatcattatcccgagggcgttccagcctcgttggagtatccgcagatccctgcttggggc
tttttagagcggaccgctgctgattacggcgatcgcgtcgcctgccactactacaaccaa
cgcatgacgtatgcggagctctttgccgcggcgcggcagatggctcatgtgctcgtcaaa
tcggggatcaagccgggtgatcgcgtgggcgtgttgttgcccaacaccccggaaatgctg
gtcgccttaaacggcatttggatggccggcggcgttgtggtcgccgttagccctctgatg
gttgcgggcgaagtcactgctttgctgaagacgacacagtgcaaaaccgttatcggtttg
gacatgttgttgccattattgttcgacggcgagtaccagcccgaatccgtgttgctgacg
acaatcgccgatcgtttgccgttgttgcaaaaatggggatacaaggcggctcggatcgta
cgcttggggatccgtagcaaagcgcgggacaagcgttgccgggatttggcaaaagaactc
gcacagggcaacccgatcttccagccgatccaacagcattcactcgatgatcccgcattt
atacttcccaccggcgggaccacagccgctccgaaggcggtcgtgctcagccatcgcaat
ctggtcgccaatgcttggcaattgcaccactggggcggtgcgacaatggccgaagaaacg
gtcttggcggtcgtaccattcttccatagctacggtttaacaacctgcgccatgaccgga
acggcgatggcggccactttggttttacaacatcgatttgtcccccgacgggtcttacgg
gcgatcgaaaccgcgcggccctcggtcttccacgccgtgcctgccatgctgtgtcagttg
aacaaattgatgcgcgatggcaagggagattatacgtcgatcaactattgcatgtcggga
ggggctccgctgccaaccagcgtggctgaggaattcaccgagcataccggtgcgattgtt
gtggaaggttacggtctgtccgaggcgagtcccgtaacacatgccggtccgttggacggg
tcagctcgggccggaacaattggtatgccgttgccggataccgaagtacgaattgtcgac
gccgatacgggatttcggccggttgccccgggcgaagtgggtgagatcacggtccgcgcc
ccgcaagtcatggttggttattggaacaatcccgaggcaaccagcagcgcgattcgcgac
ggctggttgtacacgggtgacttggcagtctgcgacgaccaaggcttctttcgcatcgtg
gaccgcaaaaaagatttaatcattacatccggatttaatgtttatccctcggatgtggaa
cgagtgatcaaacagttttcagggattcaagacgcggcggtggtcggtgtttccgatccc
gaccgaggtgaagtcgtcaaagcgatcttggttttagaacgcggcgtgcagtttgaccgc
aaagaattcttgaatcaatgcaaaatacacctagcgaaacacaagcagccaaggatgatc
gaaatcgccgaaggagatttacctcgcaattttttaggcaaggtactgcgtaaagatttg
cgtacctga
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