Symmachiella dynata: Mal52_57130
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Entry
Mal52_57130 CDS
T06944
Name
(GenBank) outer membrane porin HofQ
Organism
sdyn
Symmachiella dynata
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GFIT
Motif
Pfam:
Secretin
TPR_2
DUF7556
TPR_1
PRP6_TPR
Motif
Other DBs
NCBI-ProteinID:
QDU47185
UniProt:
A0A517ZXL1
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Position
7110239..7115368
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AA seq
1709 aa
AA seq
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MEAVRTFKEVGTLGKALGLFACGSLITASLWCGHQGFAAETNSKRSASQKNDSTAASRER
SSRALLRLGKELYAKGRYEDAVRSFRAATYAPGNLAKEERAQLEQYLSRAERKLKALPRG
RTARRITARGQSPEPSNPFAVAAQGLGSADRKAAVKKWLANARHEFERGNVAAAEKTALQ
AANIKVRFGLLEDSPQRLLEDIAAYKRKANESVFDDTNTVTRAQSTNDFEIRQAGGTEHA
TRRFPTGVPGDIVQVAGSQPAEAPHDEWRIKADSLMQKAREAAESKRLNEAYRHALSAQQ
LERKGKVQYADGEMSPTAFIEVLNSMEEKALVATGKPDAIKIQAQRLLAAAERDIAAGNF
EAAYKKVDQAESMDVAYDLLEKRPKSVRMNIAEAENAEANKFVQGGRYQRSTGSQFPSAA
EKSATPFETAQQANSPKAQAVSLIKQARKDLAAGDIEAARQKAVQAREIPVAYDVFDDQP
RLVLADIARQERMSNIAANDNLFDEEPANPFAEPAADPVKTDLNADKRQALKLLNQARLD
LKAKDVDSAQEKAKMAAQLGVKFGVMDDSPEKVLADIDYFTNSGKQAQRYAQRDTEIQAA
SGDRDKGQVENADDAEIAFQVEESTTDDKALATQLLNEARNLADKGRYDAARAKAMEAQK
LDVAYDPFDDDPSQVLKWIAKAEAAISTPAAVIFDEESDNSPSLTQSEKSGLDLFNAGES
ELRSGNRNQAYQYFLQAHHTGDRLSPRRAQQLQDYLQELRPRRDNKLRQVQYLAEEGELA
TPQTGDNGGSLLPTVDNERKVAYSKLRNDVMNAGFRAERLKTSEPEKALQLLGETLTKVE
NSDLPRDMLQPMIRRINRKRESIKSYQVQHAPVIAQQNHNAEVRDDIKRDVEIAIRIEQD
FADKVDEFNQLVKEQRYAEAEVIAKQAKALSPESPEAEVMILKSRFLRNITRSENTRALK
EEGFLNALHEVDEASIPFTGDYAMPAPKEWFEMTARRKKYAGDNRRRTEAEERIERNLER
PVSLHFDNEPLANVLNHLGSLADVNLWIDDEGLEDEGVTTNTPVTINVDGIQLKSALNLL
LEHRHLGYMIKNEVLQITSDIRRQGEVMAVTYSVADLVVPIPNFGTPSTMMGPAASTSNP
AFNAGLDYDGSSPMNVSGGQKFFDVPAAGGQAPFGGIPGLPGARSPQLGGGSGADFDSLI
DLITTTVSPDTWEEIGGPGTISEFETTLSLVIRQTQQVHEEIAELLDQLRRLQDLQVTIE
VRFVAVSDRFFERIGIDFDFDVQDNVGGPNPPVGGWGATTPPNGTYPNVTLQSGTTGGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTAGSTGFFSDPPLRQLPDLDNYPKYGSIVGYSNAN
GGAFSPDLDVPFRQGSFDIGVPDFGNFQAEAGINMGIAILSDIETFFFINAATGDERSNI
MFAPKVTLFNGQTATVTSQVQRPFVTSLIPVVGFFSVGFQPVIQTIADGVQMQVQAVISA
DRRYVRLTVIPQFSNVTDVFTFSFVSGGGGIAGGAGGTAGGVGGGAGGVTGGGIGGGGVG
GAGGGVGGGLGGAGGLGGGAAGGLGGAGGVGGGTGGIGGSGGTAGTTGTAGTSGAAAGGS
ITVQQPVVEIVQVVTTVSVPDGGTVLLGGIKRLREGRNMAGVPILNKIPYISRLFKNSGV
GRETESLMLMVTPRIIIQEEEEELLGVPL
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgttaggacctttaaggaggtaggtacgttgggtaaggcactaggattattc
gcctgtggtagcctcatcactgcatcgttgtggtgtgggcatcaaggttttgccgctgag
acaaactcgaagcgttctgcatcacagaagaacgattcgacagccgcttctcgcgagcgg
tcgtcacgagctttgttgcgactcggcaaagaattgtacgccaagggacgttatgaagat
gcggttcggtctttccgagctgcgacatacgctcccggaaatctcgccaaggaagaacgg
gcgcaactcgaacaatatttgtcacgcgccgaacgcaaactgaaagcactgcctcgtggg
agaacggctcgccggatcacggctcgtggccaatcgcccgaaccgtccaatccgttcgcc
gtcgcggcgcaaggtcttggatcagctgatcgcaaggcagccgtcaagaaatggttggcc
aatgcccgccatgaattcgaacgcggtaatgttgccgccgccgaaaaaacggcactgcaa
gccgccaacatcaaagtccgctttggactgttggaagacagcccgcaacggctgttggaa
gacattgcggcttacaagcgcaaagccaatgaaagtgtcttcgatgacaccaatacggtg
actcgcgcacaaagcacgaatgattttgaaatccgtcaagctggcggaacagaacatgcg
acgcgtcgattccccaccggagttcccggggacatcgtccaagtcgccggcagccaaccg
gctgaagctccgcatgacgaatggcgtatcaaagccgattcgttgatgcaaaaagcgcgt
gaagcggccgaatcgaaacgcctcaacgaagcgtatcgccacgccttaagcgcacaacaa
ctcgaacgcaaaggcaaagttcaatacgctgacggcgaaatgtcacccaccgcctttatc
gaagtgctcaacagcatggaagaaaaagcgttggtcgccaccggaaagccggatgccatt
aaaattcaggcacaacgcctgctggcagctgccgaacgggacatcgccgctggaaacttt
gaagcggcctataaaaaggtcgaccaagccgaaagcatggatgtcgcttacgatctgttg
gaaaaacggcccaagtcggtccgtatgaacattgccgaagcggaaaacgctgaagccaac
aaattcgtccaaggtggacgttaccaacgttcgaccggcagccaatttccttcggccgct
gagaaatcagcaaccccgttcgaaacggctcaacaggccaattcgcccaaagctcaagcc
gtgagcttgatcaaacaggcccgcaaggacctggcagccggcgacattgaagccgcccgc
caaaaagcggtgcaagcacgagagattcccgtcgcttatgatgtgttcgacgatcaaccc
cggctggtcctcgcggacatcgcccggcaagaacggatgtccaacatcgcggcaaacgat
aacctcttcgacgaagaaccggccaatccgtttgccgaaccggctgctgatccggtgaaa
accgatctaaacgccgataagcggcaagccttgaaattgctgaaccaagccagactggac
ctgaaggcgaaagacgtcgacagcgcccaagaaaaggcaaagatggccgcccaactgggg
gtcaagtttggagtcatggacgacagccccgagaaagtcttggcggacatcgactatttc
accaactccggcaaacaagcccaacgctatgctcaacgtgataccgaaatccaagccgcc
agtggcgaccgggacaagggtcaagtggagaacgctgacgacgcagaaattgcgtttcag
gtcgaggaaagcacgacggacgacaaggcattggccacccaattgctgaacgaggcccgc
aatctcgccgacaaaggtcggtatgacgcggcccgcgctaaagcgatggaagcccaaaaa
ctggacgttgcttacgatccgtttgatgatgatccttcacaggttctgaaatggattgcc
aaagccgaagccgcaatcagtacaccggcagccgtgatcttcgacgaagagagcgacaac
agcccgtcgctcacgcagtcggaaaaatcgggattggatttgttcaatgccggcgaaagc
gaactgcgtagcggtaaccgtaaccaggcttatcagtacttcctgcaggctcaccatacc
ggtgaccgcctgagcccgcgacgtgcacaacaactgcaggactacctgcaggaattgcgt
ccgcgacgcgacaacaaattgcggcaagtccaatacctcgccgaagagggcgagttggcc
accccgcaaactggtgacaatggtggttcgttgctgcccacggtcgacaacgaacgcaaa
gtcgcctattcgaaacttcgtaatgatgtgatgaacgctggcttccgggccgaacgcctg
aaaacgtccgaacccgaaaaagcgttgcaactgttgggtgaaactttgaccaaggttgag
aattcggatttgccgcgtgatatgctgcaaccgatgattcgccgcatcaatcggaaacgt
gaaagcatcaaatcgtatcaggtgcaacacgctccggtgatcgctcaacaaaaccacaat
gcggaagtccgcgacgacatcaagcgtgatgtggaaattgctatccgcatcgaacaagac
ttcgccgacaaggtggacgagttcaatcagttggttaaggaacaacgttacgccgaagcg
gaagtcatcgccaaacaagccaaagcactcagccctgagtcgcccgaagctgaggtgatg
atcttaaagtcgagattcttgcgaaacatcacacgtagcgagaatactcgtgcactcaag
gaagagggtttcttgaatgcgttgcacgaagtcgacgaagcctccattccctttaccggc
gactatgcaatgccggcacctaaggaatggtttgaaatgaccgctcgtcgcaaaaaatac
gccggcgacaaccgccgacggaccgaagcggaagagcggatcgaacgtaacctggaacgt
cccgtctcactgcacttcgacaacgagcctctggccaacgtcctcaaccatctcggcagc
ttggccgacgtgaacttgtggatcgatgacgaaggtctggaagacgaaggcgtgacgacc
aataccccggtgacgatcaacgtcgacggcatccaactcaagagtgccttgaatttgttg
ctggaacaccgccacttgggttacatgatcaagaacgaagtgctgcagatcaccagcgac
attcgccgccaaggcgaagtgatggcggtcacctacagcgtagcggacttggttgtcccg
attccgaatttcggaacgccttccacgatgatgggccctgcagccagcacgagtaatccc
gccttcaacgccgggttagactacgatggctcaagcccaatgaatgtgagcggtggtcag
aaattcttcgatgtccctgcagccggtggacaggcgccctttggcgggattcctggattg
ccgggcgcacgtagcccccaacttggtggtggatcgggtgcggactttgactctttaatc
gacttgatcacgacgacggtttcccccgacacttgggaagaaatcggcggcccgggaacg
attagcgaattcgaaacgaccctgagtttggtcattcgccaaacccaacaggttcacgaa
gaaatcgccgagttgctggaccagttgcgtcgtctgcaagacttgcaagttaccattgaa
gtccggtttgtcgccgtgtcggaccggttcttcgaacggatcggtatcgacttcgacttc
gacgtgcaggacaacgtcggtggaccgaacccacctgttggtggctggggtgcaacgact
cctcccaacggaacctatcccaacgtgacactgcaaagtggaacgacgggtggaacgacg
gggaccacgggtacgactggtaccacggggacgactggaacgactggtaccacgggaacc
acagggacgacaggaacggcaggcagcacaggattctttagtgatcctccgctgcgacag
ttgcccgacttggacaactatcccaagtacggctcgatcgtgggttacagtaacgccaac
ggtggtgccttctcacctgacttagacgttcccttccgtcaaggttcgttcgacatcggt
gtcccggactttggaaacttccaagctgaagccggtatcaacatgggtatcgcgattctg
agcgacattgaaaccttcttcttcatcaatgccgcaacgggtgacgagcggagcaatatt
atgtttgccccgaaagtcacattgttcaacggccaaacggccactgtgactagccaagtg
caacgtccgttcgtcacgagtttgattccggtcgtcggattcttctcggtcggcttccag
ccggtcattcagacgatcgctgacggtgtgcagatgcaggtccaagcggtgatttccgcc
gaccgtcgttatgtgcgactcacagtgattcctcagttctcgaacgtgactgacgtcttc
accttctcattcgtctccggtggaggtggtattgccggtggtgctggcggtacagccggt
ggagtcggcggcggagccggtggagtcactggtggcggaatcggtggcggtggagtcggt
ggtgccggtggtggcgtcggcggtggtctcggcggtgccggtggcctcggcggtggagca
gctggcggactcggcggtgccggtggtgtcggcggtggaaccggcggtattggtggttcc
ggtggaacagccggtacgacgggtactgcgggaacatccggtgcggcggcgggtggatcg
attacggttcaacaaccggtcgtcgaaatcgtccaggtcgtcacaacggtgagtgtgccg
gacggtggtactgttctcttgggcggcattaagcggctccgggaaggacggaacatggcc
ggtgtcccgatcttgaacaagattccttatatcagtcgcttgttcaagaacagtggtgtc
ggacgtgaaaccgaaagcctgatgctgatggtcacaccgcggatcattattcaggaagaa
gaggaagagttgctcggcgtgccgctttaa
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