Shigella dysenteriae 1617 (serotype 1): Asd1617_00021
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Entry
Asd1617_00021 CDS
T02933
Name
(GenBank) Transcriptional activator protein nhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdz03000
]
Asd1617_00021
Transcription factors [BR:
sdz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Asd1617_00021
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AHA62848
UniProt:
A0A0A6ZLH2
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Position
18139..19062
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AA seq
307 aa
AA seq
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MLSGREMSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFK
RKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVL
NAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSF
WCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFG
AMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSA
LFSPAVR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgttatcagggagagaaatgagcatgtctcatatcaattacaaccacttgtattacttc
tggcatgtttataaagaaggttctgtggttggcgcagcggaggcgctttatttaacacca
caaaccattaccggacagattcgggcgctggaagagcgcctgcaaggcaaattatttaag
cgcaagggacgtggtctcgagcccagcgagctgggggagctggtctatcgctatgccgat
aaaatgttcaccttgagccaggaaatgctggatatcgtgaactatcgcaaagaatccaat
ttattgtttgacgttggcgtggctgatgcactttccaaacgtctggtcagtagcgtgctg
aatgctgcagtagtagaaggcgagccgattcatcttcgctgcttcgaatccacccacgaa
atgctgctggagcaattaagccagcataaactggatatgatcatttccgactgtccgata
gattctacgcagcaggaaggcctgttctccgtgagaattggagaatgtggcgtgagtttc
tggtgtacaaatccaccgccggaaaaaccgttcccagcttgtctggaagaacggcggctt
ttgattcctgggcgacgttcaatgttagggcgcaaattgcttaactggtttaactcccag
ggattaaacgtagaaatccttggagagtttgatgatgccgctttaatgaaagcttttggt
gcgatgcacaatgcaatcttcgttgccccaacgctttatgcatatgacttttatgccgat
aaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctattttt
gctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcg
ctttttagtccagcggtgcgttaa
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