Shigella dysenteriae 1617 (serotype 1): Asd1617_01480
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Entry
Asd1617_01480 CDS
T02933
Name
(GenBank) Holliday junction DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Pathway
sdz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Asd1617_01480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdz03400
]
Asd1617_01480
Enzymes [BR:
sdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Asd1617_01480
DNA repair and recombination proteins [BR:
sdz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Asd1617_01480
RecFOR pathway proteins
Asd1617_01480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
Rad17
AAA_14
TIP49
nSTAND3
AAA_16
AAA_2
AAA_18
RNA_helicase
AAA_17
NTPase_1
Bac_DnaA
NB-ARC
AAA_24
AAA_28
ABC_tran
TsaE
NPHP3_N
bpMoxR
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AHA64307
UniProt:
E2XIK0
LinkDB
All DBs
Position
complement(1051108..1052118)
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AA seq
336 aa
AA seq
DB search
MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
TISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPEMP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagaccgtctgatttctgccggtaccactttgccggaagatgtagcagat
cgcgccattcgccctaaattactggaagagtatgttggtcagccgcaggttcgttcacag
atggagattttcatcaaagcagcgaaactgcgcggcgatgccctcgatcatttgttgatt
tttggtcctccggggttgggtaaaactacgcttgccaacattgtcgccaatgaaatgggc
gttaatttacgcacgacttctggtccggtgctggaaaaggcgggcgatttggctgcgatg
cttactaaccttgaaccgcatgacgtgctgtttattgatgagatccaccgtttatcgcca
gttgttgaagaagtgctgtacccggcaatggaagactaccaactggatatcatgattggt
gaaggtccggcggcacgctccattaaaattgatttgccgccgtttaccctgattggtgca
accacgcgcgcaggttcgctgacatcaccgttgcgcgaccgttttggtattgtgcaacgt
ctggagttttatcaggtgccggatctgcaatatatcgtcagtcgcagcgcacgctttatg
gggcttgagatgagtgatgacggcgcgctggaagttgctcgtcgcgctcgcggtacgccg
cgcattgccaaccgtctgctgcgtcgagtgcgtgatttcgccgaagtgaagcacgatggc
accatctcggcagatatcgctgctcaggcgctggatatgttgaatgtcgatgctgaaggt
ttcgattatatggaccgcaaattgttgctggcggtaatcgataagttctttggtgggccg
gtaggtctggataacctggcggcggctattggcgaagaacgtgaaactattgaggatgtg
ctggaaccttatttgattcagcaaggctttttgcagcgtacaccgcgtgggcgtatggcg
acgacgcgggcgtggaatcactttggcataacgccgccagaaatgccataa
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