Shigella dysenteriae 1617 (serotype 1): Asd1617_03014
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Entry
Asd1617_03014 CDS
T02933
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Pathway
sdz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Asd1617_03014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdz03400
]
Asd1617_03014
Enzymes [BR:
sdz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Asd1617_03014
DNA repair and recombination proteins [BR:
sdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Asd1617_03014
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Asd1617_03014
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Asd1617_03014
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHA65841
UniProt:
A0A0A6ZW50
LinkDB
All DBs
Position
complement(1991485..1992984)
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AA seq
499 aa
AA seq
DB search
MALKLISTVIFDTLADSRNNGFNLMMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRT
DSEFNLIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPK
TCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYTLRPEGINWPE
NDDGLPSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHK
LMALIDVPQMNPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDS
DTLRERLYTAKTDLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKI
LRENPQVREKVVAIFAEAEPFTPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDI
TFVDKRIEKLLFNYRARNFPETLDYAEQQRWLEHRRQVFTPEFLQGYADELQMLAQQYAD
DKEKVALLKALWQYAEEIV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctaaagctgattagtacggtgatatttgatactctggcagacagcagaaataac
ggatttaacctaatgatgaatgacggtaagcaacaatctacctttttgtttcacgattac
gaaacctttggcacgcaccccgcgttagatcgccctgcacagttcgcagccattcgcacc
gatagcgaattcaatctcatcggcgaacccgaagtcttttactgcaagcctgcggatgac
tatttaccccagccaggagcagtattaattaccggtattaccccgcaggaagcacgggcg
aaaggagaaaacgaagccgcgtttgccgcccgtattcactcgctttttaccgtaccgaag
acctgtattctgggctacaacaatgtgcgtttcgacgacgaagtcacacgcaacattttt
tatcgtaatttctacgatccttacgcctggagctggcagcatgataactcgcgctgggat
ttactggatgttatgcgtgcctgttataccctgcgcccggaaggaataaactggcctgaa
aatgatgacggtctaccgagctttcgccttgagcatttaaccaaagctaatggtattgaa
catagcaacgcccacgatgcgatggctgatgtgtacgccactattgcgatggcaaagctg
gtaaaaacgcgtcagccacgcctgtttgattatctctttacccatcgcaataaacacaaa
ctgatggcgttgattgatgttccgcagatgaaccccctagtgcacgtttccggaatgttt
ggagcatggcgcggcaataccagctgggtggcaccgctggcgtggcatcctgaaaatcgc
aatgccgtaattatggtggatttggcaggagacatttcgccattactggaactggatagc
gacacattgcgcgagcgtttatataccgcaaaaaccgatcttggcgataacgccgccgtt
ccggttaagctggtgcatatcaataaatgtccggtgctggcccaggcgaatacgctacgc
ccggaagatgccgaccgactgggaattaatcgtcagcattgcctcgataacctaaaaatt
ctgcgtgaaaatccgcaagtgcgtgaaaaagtggtggcgatattcgcggaagccgaaccg
tttacgccttcagataacgtggatgcacagctttataacggctttttcagtgacgccgat
cgcgcagcgatgaaaattgtgctggaaaccgagccacgtaatttaccggcactggatatc
acttttgttgataaacgaattgaaaaactgttgttcaattatcgggcgcgcaacttcccg
gagacgctggattatgccgagcagcaacgctggctggagcaccgccgccaggtcttcaca
ccagagtttttacagggctatgctgatgaattgcagatgctggcacaacaatatgccgat
gacaaagagaaagtggcgctgttaaaagcgctttggcagtacgcggaagagattgtctaa
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