Shigella dysenteriae 1617 (serotype 1): Asd1617_03323
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Entry
Asd1617_03323 CDS
T02933
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdz03016
]
Asd1617_03323
Enzymes [BR:
sdz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Asd1617_03323
Transfer RNA biogenesis [BR:
sdz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Asd1617_03323
Prokaryotic type
Asd1617_03323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AHA66150
LinkDB
All DBs
Position
2219833..2220768
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AA seq
311 aa
AA seq
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MKRDELMELIFLGTSAGVPTRTRNITAILLNLQHPTQSGLWLFDCGEGTQHQLLNTAFNP
GKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFVETALRISGSWTDY
PLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPL
FQELKAGKTIMLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEAT
LDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPAT
ELANDFTVFNV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgtgatgaactcatggaattaatttttttaggtacttcggccggtgtgccaacc
cgtacgcgcaatatcacggcaatattgcttaacctgcaacatccgacccagagcggtctt
tggttgtttgactgcggtgaaggcacccagcatcagctactgaataccgcctttaaccct
ggaaaactggacaagatttttatcagtcaccttcatggcgatcatctctttggtttaccc
ggcttgctgtgcagtcgttctatgtctggtattgtccaacccttaacgatttatggtccg
caaggtatccgtgagtttgtggagaccgcgctgcggattagcggctcatggaccgattat
ccgctggaaattgtcgaaattggcgctggcgaaattctcgatgatggcctgcgcaaagtg
accgcttatccaatggaacacccactggaatgttatggctatcgtattgaagaacatgat
aaaccgggtgcattaaatgcccaggcattaaaagctgctggcgtaccgcctggcccactg
tttcaggaattaaaagcgggcaaaacaatcatgctggaagatggaaggcagattaacggc
gcagattacttagccgctccagtgccaggtaaagcgctcgctattttcggcgataccggc
ccctgcgatgccgcacttgacctagctaaaggtgtcgatgtcatggtgcacgaagcgacg
ctggatataaccatggaagccaaagccaatagtcgcggtcatagctctacacgccaggct
gcgacactggcccgtgaggctggagtcggtaagctaatcattacccacgtcagctcgcgc
tatgatgacaaaggttgtcagcacctgttacgtgaatgcaggtcaattttcccggcgact
gaactagcgaatgatttcaccgtgtttaacgtttaa
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