Shigella dysenteriae 1617 (serotype 1): Asd1617_03930
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Entry
Asd1617_03930 CDS
T02933
Name
(GenBank) Formate hydrogenlyase transcriptional activator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdz03000
]
Asd1617_03930
Transcription factors [BR:
sdz03000
]
Prokaryotic type
Helix-turn-helix
Other families
Asd1617_03930
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_3
GAF_2
AAA_5
AAA
AAA_lid_14
AAA_2
Mg_chelatase
AAA_19
AAA_16
MCM
AAA_7
nSTAND3
AAA_3
DUF3736
Motif
Other DBs
NCBI-ProteinID:
AHA66757
UniProt:
E2X9V3
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All DBs
Position
2661962..2663386
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AA seq
474 aa
AA seq
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MPLAAEGHIFGGCEFIRYDDRPWSEKEFNRPQTFTQIVSVVTEQIQSRVVNNVDYELLCR
ERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHY
LDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFDTWGNHIQTLCL
LPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERLVD
ENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAI
HNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEV
GDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRL
NVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNEVYWQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgccactggcggcggaagggcatatttttggtggctgtgaatttattcgttatgacgat
cgcccctggagcgaaaaagagttcaatcgtccgcaaacatttacgcagatcgtttctgtc
gtcaccgaacaaatccagagtcgcgtcgttaacaatgtcgactatgagttgttatgccgg
gaacgcgataacttccgcatcctggtcgccatcaccaacgcggtgctttcccgcctggat
atggacgaactggtcagcgaagtcgccaaagaaatccattactatttcgatattgacgat
atcagtatcgtcttacgcagccaccgtaaaaacaaactcaacatctactccactcactat
cttgataaacagcatcccgcccacgaacagagcgaagtcgatgaagccggaaccctcacc
gaacgcgtgttcaaaagtaaagagatgctgctgattaatctccacgagcgggatgattta
gccccctatgaacgcatgttgttcgatacctggggcaaccatattcaaaccttgtgcctg
ttaccgctgatgtctggcgacaccatgctgggcgtgctgaaactggcgcaatgtgaagag
aaagtgtttaccactaccaatctgaatttactgcgccagattgccgaacgtgtggcaatc
gctgtcgataacgccctcgcctatcaggaaatccatcgtctgaaagaacggctggttgat
gaaaacctcgccctgaccgagcagctcaacaatgttgatagtgaatttggcgagattatt
ggccgcagcgaagccatgtacagcgtgcttaaacaagttgaaatggtggcgcaaagtgac
agtaccgtgctgatcctcggtgaaactggcacgggtaaagagctgattgcccgtgctatc
cataatctcagtgggcgtaataatcgccgcatggtcaaaatgaactgcgcggcgatgcct
gccggattgctggagagcgatctgtttggtcatgagcgtggggcttttaccggtgccagc
gcccagcgtatcggtcgttttgaactggcggataaaagctccctgttcctcgacgaagtg
ggcgatatgccactggagttacagccgaagttgctgcgtgtattgcaggaacaggagttt
gaacgcctcggcagcaacaaaatcattcagacggacgtgcgtctaatcgccgcgactaac
cgcgatctgaaaaaaatggtcgccgaccgtgagttccgtagcgatctctattaccgcctg
aacgtattcccgattcaccttccgccactacgcgagcgtccggaagatattccgctgctg
gcgaaagcctttaccttcaaaattgcccgtcgtctggggcgcaatatcgacagcattcct
gccgagacgttgcgcaccttgagcaatgaggtgtactggcaatag
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