Shigella dysenteriae 1617 (serotype 1): Asd1617_04057
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Entry
Asd1617_04057 CDS
T02933
Name
(GenBank) L-fucose operon activator
KO
K02430
DeoR family transcriptional regulator, L-fucose operon activator
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdz03000
]
Asd1617_04057
Transcription factors [BR:
sdz03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Asd1617_04057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_Mga
TrmB
HTH_Crp_2
TFIIE_alpha
Mga
HTH_PafC
HTH_36
HTH_69
HTH_AsnC-type
HTH_9
HTH_Tnp_ISL3
HTH_20
Arg_repressor
HTH_32
HTH_24
PCI
Sigma70_r4
DUF1670
Put_DNA-bind_N
AlkZ-rel
Motif
Other DBs
NCBI-ProteinID:
AHA66884
UniProt:
A0A0A6ZYJ8
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Position
2748433..2749173
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AA seq
246 aa
AA seq
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MKNMKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGRAKY
IHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDASSTCWYLARQLPDINI
QVFTNSHPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQLKSLEIDLFIFSCEGID
SSSALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEARIGHLDEVTHIISDERQVA
TSLVTA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatatgaaagcggcacgccagcaagcgatagtcgacctgctgctgaaccatacc
agcctgaccacggaagctctctctgaacagctaaaggtcagtaaagaaaccattcgtcgc
gatctcaatgaattacagacgcagggtaaaattctgcgcaatcatgggcgcgctaaatat
atccaccgtcaaaatcaagacagtggcgatccctttcacatccggctgaaaagccattat
gcgcataaagcagatatcgcgcgcgaggcgctcgcgtggattgaagaagggatggtgata
gccttagacgccagttcaacttgctggtatctggcacgccagttgcctgacatcaacatt
caggtcttcaccaatagccatccgatttgccatgaactcggtaaacgcgaacgcattcaa
ctgatcagttccggcggcacacttgagcgcaaatatggctgttacgtcaatccctcgctg
atttcccaacttaaatcgctggaaatcgatctgtttattttttcttgtgaagggatcgat
agcagcagcgcactgtgggactccaatgccatcaacgctgattacaaatcgatgctatta
aaacgcgccgcgcaatcgttgttattgattgataaaagcaaatttaatcgttcaggggaa
gcccgcatcgggcatctggatgaggtaacgcacattatttctgatgagcgccaggttgca
acttctttggtaacagcctga
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