Shigella dysenteriae 1617 (serotype 1): Asd1617_04060
Help
Entry
Asd1617_04060 CDS
T02933
Name
(GenBank) Glycine cleavage system transcriptional activator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdz03000
]
Asd1617_04060
Transcription factors [BR:
sdz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Asd1617_04060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AHA66887
UniProt:
A0A0A6ZY86
LinkDB
All DBs
Position
complement(2750701..2751639)
Genome browser
AA seq
312 aa
AA seq
DB search
MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAY
PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWLGLRVEKLYAEYLLPVCSPLLLTGEKPL
KTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALAN
NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQENSA
FVMNNNLRRVRP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgattaccaccgctaaatgccttacgagtttttgatgccgcagcacgccat
ttaagtttcactcgcgcagcagaagagctttttgtgacccaggccgcagtaagtcatcaa
atcaagtctcttgaggattttctggggctaaaactgttccgccgccgtaatcgttcactc
ctgctgaccgaggaaggtcaaagctatttcctcgatatcaaagagatattttcgcaatta
accgaagcgacgcgtaaactccaggcccgtagcgccaagggggcgttgacggtcagttta
ctccccagtttcgccatccattggttggttccgcgactttccagctttaattcagcttat
ccgggaattgacgttcgaatccaggcggttgatcgtcaggaagataagctggcggatgat
gttgatgtggcgatattttatggtcggggcaactggctggggctacgggtggaaaaactg
tacgccgaatatttattgccggtgtgttcgccgctactgctgactggcgaaaaacccttg
aagaccccggaagatctggctaaacatacgttattacatgatgcgtcacgccgtgactgg
cagacatatactcgtcaattggggttaaatcatatcaacgttcagcaagggccaattttt
agccatagcgccatggtgctgcaagcggctattcacgggcagggagtggcgctggcaaat
aacgtgatggcgcaatctgaaattgaagccggacgtcttgtttgcccgtttaatgatgtt
ctggtcagtaaaaacgctttttatctggtttgtcatgacagccaggcagaactgggtaaa
atagccgcctttcgccaatggatcctggcgaaagccgctgctgaacaagaaaattccgct
ttcgttatgaacaataatttacgtagggtacgaccatga
DBGET
integrated database retrieval system