Shigella dysenteriae 1617 (serotype 1): Asd1617_04089
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Entry
Asd1617_04089 CDS
T02933
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Pathway
sdz00300
Lysine biosynthesis
sdz00470
D-Amino acid metabolism
sdz01100
Metabolic pathways
sdz01110
Biosynthesis of secondary metabolites
sdz01120
Microbial metabolism in diverse environments
sdz01230
Biosynthesis of amino acids
Module
sdz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Asd1617_04089
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Asd1617_04089
Enzymes [BR:
sdz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Asd1617_04089
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AHA66916
UniProt:
E2X6T3
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All DBs
Position
complement(2786465..2787727)
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AA seq
420 aa
AA seq
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MPHSLFSTDTALTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVN
AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR
HHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQGEEAVD
TEHYYGLWNAARQQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDA
GFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRA
LLEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacattcactgttcagcaccgataccgctctcaccgccgaaaatctgctgcgtttg
cccgctgaatttggctgcccggtgtgggtctacgatgcgcaaattattcgtcggcagatt
gcagcgctgaaacagtttgatgtggtgcgctttgcacagaaagcctgttccaatattcat
attttgcgcttaatgcgtgagcagggcgtgaaagtggattccgtctcgttaggcgaaata
gagcgtgcgttggcggcgggttacaatccgcaaacgcaccccgatgatattgtttttacg
gcagatgttatcgatcaggcgacgcttgaacgcgtcagtgaattgcaaattccggtgaat
gcgggttctgttgatatgctcgaccaactgggccaggtttcgcctgggcatcgggtatgg
ctgcgcgttaacccggggtttggtcacggacatagccaaaaaaccaataccggtggcgaa
aacagcaagcacggtatctggtacaccgatctgcccgccgcactggacgtgatacaacgt
catcatctgcagctggtcggcattcacatgcacattggttctggcgttgattatgcccat
ctggaacaggtgtgtggtgctatggtacgtcaggtcatcgaattcggtcaggatttacag
gctatttctgcaggcggtgggctttctattccttatcaacagggtgaagaggcggttgat
accgagcattattatggtctgtggaatgccgcgcgtcagcaaatcgcccgccatttgggc
caccctgtgaaactggaaattgaaccgggtcgcttcctggtagcgcagtctggcgtgtta
attactcaggtgcggagcgtcaaacaaatgggtagccgccactttgtgctggttgatgcc
gggttcaacgatctgatgcgcccggcaatgtacggtagttaccaccatatcagtgccctg
gcagctgatggtcgttctctggaacacgcgccaacggtggaaaccgtcgtcgccgggcca
ttatgtgaatcgggcgatgtctttacccagcaggaagggggaaatgttgaaacccgcgcc
ttgctggaagtgaaggcaggggattatctggtactgcatgatacgggggcatatggcgcg
tcaatgtcatccaattacaatagccgtccgctgttaccagaagttctgtttgataatggt
caggcgcggttgattcgccgtcgccagaccatcgaagaattattggcgctggaattgctt
taa
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