Shigella dysenteriae 1617 (serotype 1): Asd1617_04452
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Entry
Asd1617_04452 CDS
T02933
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Pathway
sdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Asd1617_04452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdz03019
]
Asd1617_04452
03016 Transfer RNA biogenesis [BR:
sdz03016
]
Asd1617_04452
Enzymes [BR:
sdz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Asd1617_04452
Messenger RNA biogenesis [BR:
sdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Asd1617_04452
Transfer RNA biogenesis [BR:
sdz03016
]
Prokaryotic type
tRNA degradation factors
Asd1617_04452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
aRib
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_SLS1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AHA67279
UniProt:
A0A0A6ZZL0
LinkDB
All DBs
Position
complement(3049831..3052053)
Genome browser
AA seq
740 aa
AA seq
DB search
MSLVARMRRRSGINTSAVRYCLRKRKDITLLNPIVRKFQYGQHTVTLETGMMARQATAAV
MVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLI
ARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGA
ARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQ
QQVVIQNINELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVD
VIKSETIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRT
GVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETG
IVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALM
DAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKI
EGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIKDVIGK
GGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRVYTGKVTR
IVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLLMGQEVPVKVLEVDRQGRIRLSIKE
ATEQSQPAAAPEAPAAEQGE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgtcattagtcgcgaggatgcgcagaagatcgggtattaacaccagtgccgtaaggtac
tgtctaagaaagagaaaggatattacattgcttaatccgatcgttcgtaaattccagtac
ggccaacacaccgtgactctggaaaccggcatgatggctcgtcaggctactgccgctgtt
atggttagcatggatgacaccgcggtatttgttaccgttgttggccagaaaaaagccaaa
ccaggtcaggacttcttcccactgaccgttaactatcaggagcgtacctacgctgctggt
cgtatcccgggtagcttcttccgtcgtgaaggtcgtccaagcgaaggcgaaaccctgatc
gcgcgtctgattgaccgcccgattcgcccgctgttcccggaaggcttcgtcaacgaagtt
caggttatcgccaccgtggtttctgttaacccgcaggttaacccggatatcgtcgcgatg
attggtgcttccgcagcactgtctctgtctggtattccgttcaatggtccgattggtgct
gcccgcgtaggttacatcaatgaccagtacgtactgaacccgacacaggacgagctgaaa
gagagcaaactggatctggttgttgcgggtactgaagccgctgtactgatggttgaatct
gaagctgaactgctgagcgaagaccagatgctgggcgcagtagtgttcggtcatgaacaa
cagcaggttgttattcagaacatcaatgaactggtgaaagaagccggtaaaccgcgttgg
gactggcagccggagccggtaaacgaagcgctgaacgcgcgcgttgctgcactggctgaa
gctcgtctgagcgatgcttaccgcatcaccgacaaacaagagcgttatgcgcaggttgat
gtcatcaaatctgaaaccatcgcgacgctgcttgctgaagacgaaaccctggacgaaaac
gaactgggtgaaattctgcacgcgatcgagaaaaacgttgttcgtagccgcgtactggca
ggcgaaccgcgtatcgatggtcgtgaaaaagatatgatccgtggtctggatgtgcgtact
ggcgtgctgccgcgtactcacggttctgcgctgttcacccgtggtgaaacgcaggcgctg
gttaccgcaacgctgggtactgctcgtgacgcgcaggttcttgatgaactgatgggcgaa
cgtaccgataccttcctgttccactacaacttccctccgtactccgtaggcgaaaccggc
atagtcggttctccgaagcgtcgtgaaattggtcacggtcgtctggcgaagcgcggcgtg
ctggcagtaatgccggatatggacaaattcccgtacaccgtacgtgttgtgtctgaaatc
actgaatccaacggttcttcttctatggcttccgtgtgcggtgcgtctctggcgctgatg
gacgcaggtgtgccaatcaaagctgccgttgcgggtatcgcaatgggtctggtgaaagaa
ggcgacaactacgttgtactgtctgacattttgggcgacgaagatcacctgggcgatatg
gacttcaaagttgcgggttcccgcgacggtatctctgcactgcagatggatatcaaaatt
gaaggtatcaccaaagagatcatgcaggttgcactgaaccaggctaaaggtgcgcgtctg
cacatcctgggtgtaatggaacaggcgatcaacgcgccacgtggcgatatctctgagttc
gctccgcgtatccataccatcaagatcaacccggacaagatcaaagacgttatcggtaaa
ggcggctctgtgatccgtgccctgaccgaagaaactggcaccaccatcgaaatcgaagat
gacggtactgtgaagatcgcagcgaccgatggcgagaaagcgaaacacgctattcgtcgt
atcgaagagatcactgcagaaattgaagtgggccgcgtctacactggtaaagtgacccgt
atcgttgacttcggcgcatttgttgccatcggcggcggtaaagaaggtctggtccacatc
tctcaaatcgctgacaaacgcgttgagaaagtgaccgattacctgctgatgggtcaggaa
gtaccggtgaaagttctggaagttgatcgccagggccgtatccgtctgagcattaaagaa
gcgactgagcagtctcaacctgctgcagcaccggaagctccggctgctgaacagggcgag
taa
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