Shigella dysenteriae 1617 (serotype 1): Asd1617_04454
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Entry
Asd1617_04454 CDS
T02933
Name
(GenBank) TRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdz03016
]
Asd1617_04454
Enzymes [BR:
sdz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Asd1617_04454
Transfer RNA biogenesis [BR:
sdz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Asd1617_04454
Prokaryotic type
Asd1617_04454
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GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHA67281
UniProt:
E2X7W5
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All DBs
Position
complement(3052631..3053575)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKLYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgttttgttgctggataaaccg
cagggtatgtccagcaacgatgcgctgcaaaaagtgaaacggatttataacgccaaccgt
gccgggcataccggtgcgctggacccactggcgaccggcatgttgccgatttgcctcggg
gaagcgacgaaattttcccagtatctgctggactccgacaaactctatcgggtgattgcg
cgtcttggacagcgtaccgatacttctgatgccgacggacaaatcgttgaagaacgtccg
gtaacctttagcgcagaacaactggcggcggcactggatactttccgtggcgatatcgaa
cagatcccatcgatgtattcagcactgaaataccagggcaaaaaactgtacgaatatgcg
cgtcagggcattgaagttccgcgtgaagcgcgtccaattaccgtttatgaattgctgttt
attcgccatgaaggcaatgagctggagctggaaattcactgctcaaaaggcacttatatc
cgcactatcattgacgacctgggtgagaaactcggctgcggcgcgcatgttatttacctg
cgccgtctggcggtaagtaaatatccggttgaacggatggtgaccctggagcacctgcgt
gaacttgttgagcaagctgaacagcaggatattccggctgcggagttacttgatccatta
ctgatgccaatggacagtccagcttcggactatccggtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccagttcgtacatctggcgcgccgctggaaggactg
gttcgcgtcacggaaggtgagaacggcaagtttatcggtatgggcgaaattgacgatgaa
ggacgcgttgcgcctcgtcgtctggtggttgaatacccggcgtaa
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