Shigella dysenteriae 1617 (serotype 1): Asd1617_04998
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Entry
Asd1617_04998 CDS
T02933
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Pathway
sdz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Asd1617_04998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdz03400
]
Asd1617_04998
Enzymes [BR:
sdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Asd1617_04998
DNA repair and recombination proteins [BR:
sdz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Asd1617_04998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
AHA67825
UniProt:
A0A0A7A0Z8
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All DBs
Position
3489437..3491707
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AA seq
756 aa
AA seq
DB search
MQTDPHSSTAMCILTHRISSQDDAMPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVLVPF
GKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVL
FHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVA
ELEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT
FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL
HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYH
ARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPTIQHVLDLKG
QKVQAGLAPALITRMRQHLQANNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ
AQQHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEHTLAPLFPGVPISRIDRDTTS
RKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQ
LYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSH
VIVRAEDHNNQHAPLFLQQLRNLILSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHP
SRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIEG
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatccgcactcttctacggcaatgtgtatactaacccaccgaatttcaagt
caggatgatgctatgcccgttgcccacgttgccttgcccgttccgcttcctcgtaccttt
gactatctgctgccagaaggcatgacggttaaagctgggtgtcgcgtgctcgtgccgttt
ggcaaacagcaggagcgcatcgggattgtggtatcagttagcgatgccagcgaactgccg
ctcaatgagctaaaagcggtagtcgaagtgctggatagtgagccggtgtttactcactcc
gtctggcgattgctgctatgggcggcagattactatcatcatccgattggcgatgtgctg
tttcatgccttgccgattttactacgccaggggcggcctgcggcgaacgcgccgatgtgg
tactggtttgccactgaacaaggtcaggcggtggatctgaacagcctgaaacgttcgccc
aagcaacaacaggcgctggcagcgttacggcaaggcaaaatctggcgtgatcaggtcgcg
gaacttgaatttaatgatgccgcgttacaggcgctgcgcaaaaaaggtctgtgtgattta
gcaagtgaaacaccagagtttagcgactggcgaacgaactatgccgtttctggtgaacgg
ttgcgattgaataccgaacaggccaccgccgttggcgcaattcatagcgcagcggatacc
ttctctgcctggctactggcgggcgttactggttccggtaaaacagaagtttatttgagc
gtactggagaacgtgctcgctcagggcaaacaggcgctggtgatggtgccggaaatcggc
ctgacaccgcaaactatcgcccgttttcgtgaacgttttaatgcccccgtagaagttctg
cattccggcctgaacgacagcgagcgtctttcggcgtggttgaaagcgaaaaatggtgag
gcggcgattgtgatcggcacccgctccgcgctgtttacgccgtttaaaaatctcggtgtg
attgtcattgatgaagagcacgacagttcctacaagcagcaggaaggctggcgctatcat
gcccgcgacctggcggtttatcgtgcgcacagcgagcaaatcccgattattcttggctcc
gcaacacccgcactggaaacgttatgcaacgtccagcagaaaaaataccgcctgctgcgc
ctgacgcgtcgggcggggaatgcgcgtccgacaattcaacacgtgctggatttaaaaggt
cagaaggtgcaggcggggctggctccggcgttaatcacccgtatgcgccagcatttacag
gccaataatcaggttatcctctttcttaatcgtcggggttttgcgcctgcgctgctgtgc
cacgactgcggctggatagccgaatgcccacgttgcgatcactactacacgctgcatcag
gcgcaacagcatttgcgctgtcaccactgtgacagccaacgcccggtgccgcgccagtgc
ccttcctgcggttccacgcacctggtacccgtggggctgggcaccgaacagcttgaacat
acgctcgcgccgttattccctggtgtgcccatttctcgtatcgaccgcgataccaccagc
cgcaaaggagcgctggaacaacaactggcggaagtgcatcgcggcggcgcgaggatcttg
attggcacgcaaatgctggcgaaaggtcaccactttccggatgtgacgctggtagcgtta
ctggatgtggacggcgcgctgttttctgccgattttcgctcggcagagcgttttgcccag
ctatacacccaggtagcaggccgtgccgggcgtgcgggtaaacagggcgaagtggtgctg
caaacgcatcatccggaacacccgctattgcaaacgttgctctataaaggctacgacgct
tttgccgaacaggcactggctgagcgacgcatgatgcagctgccgccgtggaccagccat
gtgattgtgcgtgcggaagatcataacaatcagcatgcgccgctgttcctgcaacaactg
cgtaatctgatcctctccagcccgctggcagacgacaaattgtgggttctcggtccggtt
ccggcactggcacctaaacgtggcggtcgctggcgctggcagatattgttgcagcaccct
tcccgcgtgcgcttgcaacacatcattaacggtacgctggcactcatcaatacaataccg
gattcccgtaaggtgaaatgggtgctggatgttgatccgattgagggttaa
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